Rscript ~/code/spp/spp_package/run_spp.R -c=L3493-Hanbang_WT_NRSF.hg38-male.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3493-Hanbang_WT_NRSF.hg38-male.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3494-Hanbang_HS_NRSF.hg38-male.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3494-Hanbang_HS_NRSF.hg38-male.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3495-Hanbang_AS_NRSF.hg38-male.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3495-Hanbang_AS_NRSF.hg38-male.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3496-lung_firboblasts_H3K27me3.hg38-male.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3496-lung_firboblasts_H3K27me3.hg38-male.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3496-lung_firboblasts_H3K27me3.merlin.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3496-lung_firboblasts_H3K27me3.merlin.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3497-lung_firboblasts_CTCF.hg38-male.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3497-lung_firboblasts_CTCF.hg38-male.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3497-lung_firboblasts_CTCF.merlin.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3497-lung_firboblasts_CTCF.merlin.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3498-lung_firboblasts_H3K4me3.hg38-male.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3498-lung_firboblasts_H3K4me3.hg38-male.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3498-lung_firboblasts_H3K4me3.merlin.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3498-lung_firboblasts_H3K4me3.merlin.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3499-lung_firboblasts_4H8.hg38-male.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3499-lung_firboblasts_4H8.hg38-male.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3499-lung_firboblasts_4H8.merlin.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3499-lung_firboblasts_4H8.merlin.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3500-lung_firboblasts_H3K27ac.hg38-male.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3500-lung_firboblasts_H3K27ac.hg38-male.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3500-lung_firboblasts_H3K27ac.merlin.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3500-lung_firboblasts_H3K27ac.merlin.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3501-lung_firboblasts_H3K9me3.hg38-male.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3501-lung_firboblasts_H3K9me3.hg38-male.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3501-lung_firboblasts_H3K9me3.merlin.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3501-lung_firboblasts_H3K9me3.merlin.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3502-lung_firboblasts_H3K4me1.hg38-male.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3502-lung_firboblasts_H3K4me1.hg38-male.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3502-lung_firboblasts_H3K4me1.merlin.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3502-lung_firboblasts_H3K4me1.merlin.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3503-Hanbang_WT_input.hg38-male.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3503-Hanbang_WT_input.hg38-male.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3504-Hanbang_HS_input.hg38-male.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3504-Hanbang_HS_input.hg38-male.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3505-Hanbang_AS_input.hg38-male.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3505-Hanbang_AS_input.hg38-male.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3506-lung_firboblasts_HCMV-Input.hg38-male.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3506-lung_firboblasts_HCMV-Input.hg38-male.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3506-lung_firboblasts_HCMV-Input.merlin.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3506-lung_firboblasts_HCMV-Input.merlin.1x36mers.QC