python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3493-Hanbang_WT_NRSF.hg38-male.1x36mers.unique.bam SAMstats-L3493-Hanbang_WT_NRSF.hg38-male.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3494-Hanbang_HS_NRSF.hg38-male.1x36mers.unique.bam SAMstats-L3494-Hanbang_HS_NRSF.hg38-male.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3495-Hanbang_AS_NRSF.hg38-male.1x36mers.unique.bam SAMstats-L3495-Hanbang_AS_NRSF.hg38-male.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3496-lung_firboblasts_H3K27me3.hg38-male.1x36mers.unique.bam SAMstats-L3496-lung_firboblasts_H3K27me3.hg38-male.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3496-lung_firboblasts_H3K27me3.merlin.1x36mers.unique.bam SAMstats-L3496-lung_firboblasts_H3K27me3.merlin.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Viruses/HCMV/merlin.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3497-lung_firboblasts_CTCF.hg38-male.1x36mers.unique.bam SAMstats-L3497-lung_firboblasts_CTCF.hg38-male.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3497-lung_firboblasts_CTCF.merlin.1x36mers.unique.bam SAMstats-L3497-lung_firboblasts_CTCF.merlin.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Viruses/HCMV/merlin.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3498-lung_firboblasts_H3K4me3.hg38-male.1x36mers.unique.bam SAMstats-L3498-lung_firboblasts_H3K4me3.hg38-male.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3498-lung_firboblasts_H3K4me3.merlin.1x36mers.unique.bam SAMstats-L3498-lung_firboblasts_H3K4me3.merlin.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Viruses/HCMV/merlin.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3499-lung_firboblasts_4H8.hg38-male.1x36mers.unique.bam SAMstats-L3499-lung_firboblasts_4H8.hg38-male.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3499-lung_firboblasts_4H8.merlin.1x36mers.unique.bam SAMstats-L3499-lung_firboblasts_4H8.merlin.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Viruses/HCMV/merlin.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3500-lung_firboblasts_H3K27ac.hg38-male.1x36mers.unique.bam SAMstats-L3500-lung_firboblasts_H3K27ac.hg38-male.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3500-lung_firboblasts_H3K27ac.merlin.1x36mers.unique.bam SAMstats-L3500-lung_firboblasts_H3K27ac.merlin.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Viruses/HCMV/merlin.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3501-lung_firboblasts_H3K9me3.hg38-male.1x36mers.unique.bam SAMstats-L3501-lung_firboblasts_H3K9me3.hg38-male.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3501-lung_firboblasts_H3K9me3.merlin.1x36mers.unique.bam SAMstats-L3501-lung_firboblasts_H3K9me3.merlin.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Viruses/HCMV/merlin.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3502-lung_firboblasts_H3K4me1.hg38-male.1x36mers.unique.bam SAMstats-L3502-lung_firboblasts_H3K4me1.hg38-male.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3502-lung_firboblasts_H3K4me1.merlin.1x36mers.unique.bam SAMstats-L3502-lung_firboblasts_H3K4me1.merlin.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Viruses/HCMV/merlin.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3503-Hanbang_WT_input.hg38-male.1x36mers.unique.bam SAMstats-L3503-Hanbang_WT_input.hg38-male.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3504-Hanbang_HS_input.hg38-male.1x36mers.unique.bam SAMstats-L3504-Hanbang_HS_input.hg38-male.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3505-Hanbang_AS_input.hg38-male.1x36mers.unique.bam SAMstats-L3505-Hanbang_AS_input.hg38-male.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3506-lung_firboblasts_HCMV-Input.hg38-male.1x36mers.unique.bam SAMstats-L3506-lung_firboblasts_HCMV-Input.hg38-male.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3506-lung_firboblasts_HCMV-Input.merlin.1x36mers.unique.bam SAMstats-L3506-lung_firboblasts_HCMV-Input.merlin.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Viruses/HCMV/merlin.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired