tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_0/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_0-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_0-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_100/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_100-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_100-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_101/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_101-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_101-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_102/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_102-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_102-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_103/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_103-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_103-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_104/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_104-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_104-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_105/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_105-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_105-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_106/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_106-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_106-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_107/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_107-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_107-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_108/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_108-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_108-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_109/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_109-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_109-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_10/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_10-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_10-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_110/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_110-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_110-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_111/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_111-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_111-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_112/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_112-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_112-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_113/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_113-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_113-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_114/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_114-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_114-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_115/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_115-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_115-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_116/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_116-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_116-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_117/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_117-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_117-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_118/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_118-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_118-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_119/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_119-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_119-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_11/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_11-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_11-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_120/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_120-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_120-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_121/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_121-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_121-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_122/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_122-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_122-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_123/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_123-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_123-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_124/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_124-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_124-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_125/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_125-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_125-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_126/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_126-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_126-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_127/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_127-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_127-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_128/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_128-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_128-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_129/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_129-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_129-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_12/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_12-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_12-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_130/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_130-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_130-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_131/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_131-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_131-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_132/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_132-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_132-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_133/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_133-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_133-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_134/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_134-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_134-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_135/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_135-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_135-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_136/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_136-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_136-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_137/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_137-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_137-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_138/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_138-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_138-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_139/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_139-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_139-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_13/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_13-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_13-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_140/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_140-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_140-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_141/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_141-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_141-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_142/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_142-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_142-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_143/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_143-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_143-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_144/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_144-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_144-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_145/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_145-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_145-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_146/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_146-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_146-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_147/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_147-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_147-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_148/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_148-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_148-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_149/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_149-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_149-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_14/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_14-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_14-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_150/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_150-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_150-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_151/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_151-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_151-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_152/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_152-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_152-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_153/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_153-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_153-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_154/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_154-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_154-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_155/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_155-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_155-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_156/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_156-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_156-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_157/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_157-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_157-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_158/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_158-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_158-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_159/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_159-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_159-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_15/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_15-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_15-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_160/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_160-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_160-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_161/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_161-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_161-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_162/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_162-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_162-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_163/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_163-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_163-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_164/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_164-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_164-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_165/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_165-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_165-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_166/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_166-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_166-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_167/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_167-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_167-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_168/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_168-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_168-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_169/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_169-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_169-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_16/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_16-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_16-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_170/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_170-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_170-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_171/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_171-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_171-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_172/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_172-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_172-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_173/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_173-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_173-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_174/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_174-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_174-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_175/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_175-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_175-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_176/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_176-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_176-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_177/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_177-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_177-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_178/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_178-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_178-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_179/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_179-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_179-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_17/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_17-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_17-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_180/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_180-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_180-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_181/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_181-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_181-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_182/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_182-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_182-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_183/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_183-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_183-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_184/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_184-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_184-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_185/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_185-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_185-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_186/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_186-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_186-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_187/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_187-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_187-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_188/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_188-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_188-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_189/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_189-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_189-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_18/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_18-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_18-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_190/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_190-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_190-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_191/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_191-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_191-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_192/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_192-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_192-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_193/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_193-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_193-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_194/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_194-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_194-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_195/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_195-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_195-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_196/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_196-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_196-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_197/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_197-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_197-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_198/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_198-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_198-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_199/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_199-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_199-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_19/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_19-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_19-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_1/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_1-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_1-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_200/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_200-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_200-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_201/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_201-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_201-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_202/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_202-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_202-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_203/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_203-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_203-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_204/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_204-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_204-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_205/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_205-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_205-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_206/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_206-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_206-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_207/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_207-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_207-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_208/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_208-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_208-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_209/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_209-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_209-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_20/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_20-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_20-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_210/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_210-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_210-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_211/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_211-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_211-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_212/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_212-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_212-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_213/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_213-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_213-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_214/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_214-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_214-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_215/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_215-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_215-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_216/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_216-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_216-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_217/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_217-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_217-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_218/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_218-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_218-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_219/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_219-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_219-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_21/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_21-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_21-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_220/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_220-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_220-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_221/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_221-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_221-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_222/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_222-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_222-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_223/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_223-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_223-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_224/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_224-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_224-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_225/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_225-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_225-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_226/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_226-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_226-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_227/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_227-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_227-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_228/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_228-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_228-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_229/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_229-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_229-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_22/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_22-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_22-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_230/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_230-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_230-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_231/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_231-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_231-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_232/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_232-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_232-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_233/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_233-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_233-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_234/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_234-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_234-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_235/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_235-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_235-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_236/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_236-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_236-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_237/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_237-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_237-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_238/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_238-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_238-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_239/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_239-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_239-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_23/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_23-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_23-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_240/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_240-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_240-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_241/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_241-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_241-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_242/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_242-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_242-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_243/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_243-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_243-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_244/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_244-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_244-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_245/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_245-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_245-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_246/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_246-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_246-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_247/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_247-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_247-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_248/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_248-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_248-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_249/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_249-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_249-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_24/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_24-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_24-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_250/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_250-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_250-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_251/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_251-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_251-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_252/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_252-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_252-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_253/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_253-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_253-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_254/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_254-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_254-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_255/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_255-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_255-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_256/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_256-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_256-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_257/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_257-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_257-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_258/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_258-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_258-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_259/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_259-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_259-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_25/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_25-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_25-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_260/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_260-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_260-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_261/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_261-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_261-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_262/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_262-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_262-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_263/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_263-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_263-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_264/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_264-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_264-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_265/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_265-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_265-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_266/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_266-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_266-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_267/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_267-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_267-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_268/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_268-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_268-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_269/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_269-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_269-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_26/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_26-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_26-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_270/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_270-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_270-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_271/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_271-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_271-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_272/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_272-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_272-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_273/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_273-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_273-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_274/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_274-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_274-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_275/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_275-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_275-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_276/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_276-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_276-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_277/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_277-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_277-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_278/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_278-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_278-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_279/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_279-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_279-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_27/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_27-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_27-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_280/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_280-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_280-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_281/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_281-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_281-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_282/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_282-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_282-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_283/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_283-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_283-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_284/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_284-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_284-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_285/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_285-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_285-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_286/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_286-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_286-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_287/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_287-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_287-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_288/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_288-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_288-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_289/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_289-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_289-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_28/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_28-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_28-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_290/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_290-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_290-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_291/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_291-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_291-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_292/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_292-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_292-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_293/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_293-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_293-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_294/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_294-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_294-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_295/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_295-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_295-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_296/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_296-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_296-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_297/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_297-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_297-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_298/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_298-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_298-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_299/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_299-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_299-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_29/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_29-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_29-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_2/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_2-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_2-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_300/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_300-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_300-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_301/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_301-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_301-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_302/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_302-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_302-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_303/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_303-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_303-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_304/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_304-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_304-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_305/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_305-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_305-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_306/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_306-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_306-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_307/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_307-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_307-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_308/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_308-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_308-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_309/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_309-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_309-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_30/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_30-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_30-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_310/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_310-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_310-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_311/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_311-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_311-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_312/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_312-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_312-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_313/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_313-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_313-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_314/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_314-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_314-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_315/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_315-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_315-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_316/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_316-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_316-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_317/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_317-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_317-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_318/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_318-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_318-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_319/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_319-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_319-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_31/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_31-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_31-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_320/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_320-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_320-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_321/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_321-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_321-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_322/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_322-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_322-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_323/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_323-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_323-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_324/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_324-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_324-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_325/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_325-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_325-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_326/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_326-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_326-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_327/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_327-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_327-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_328/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_328-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_328-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_329/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_329-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_329-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_32/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_32-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_32-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_330/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_330-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_330-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_331/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_331-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_331-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_332/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_332-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_332-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_333/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_333-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_333-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_334/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_334-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_334-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_335/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_335-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_335-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_336/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_336-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_336-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_337/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_337-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_337-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_338/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_338-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_338-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_339/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_339-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_339-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_33/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_33-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_33-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_340/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_340-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_340-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_341/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_341-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_341-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_342/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_342-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_342-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_343/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_343-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_343-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_344/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_344-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_344-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_345/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_345-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_345-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_346/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_346-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_346-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_347/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_347-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_347-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_348/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_348-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_348-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_349/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_349-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_349-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_34/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_34-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_34-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_350/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_350-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_350-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_351/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_351-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_351-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_352/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_352-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_352-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_353/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_353-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_353-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_354/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_354-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_354-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_355/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_355-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_355-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_356/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_356-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_356-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_357/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_357-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_357-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_358/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_358-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_358-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_359/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_359-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_359-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_35/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_35-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_35-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_360/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_360-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_360-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_361/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_361-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_361-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_362/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_362-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_362-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_363/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_363-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_363-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_364/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_364-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_364-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_365/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_365-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_365-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_366/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_366-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_366-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_367/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_367-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_367-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_368/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_368-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_368-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_369/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_369-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_369-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_36/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_36-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_36-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_370/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_370-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_370-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_371/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_371-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_371-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_372/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_372-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_372-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_373/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_373-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_373-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_374/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_374-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_374-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_375/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_375-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_375-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_376/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_376-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_376-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_377/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_377-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_377-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_378/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_378-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_378-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_379/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_379-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_379-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_37/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_37-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_37-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_380/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_380-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_380-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_381/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_381-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_381-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_382/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_382-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_382-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_383/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_383-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_383-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_384/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_384-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_384-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_385/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_385-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_385-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_386/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_386-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_386-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_387/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_387-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_387-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_388/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_388-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_388-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_389/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_389-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_389-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_38/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_38-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_38-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_390/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_390-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_390-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_391/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_391-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_391-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_392/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_392-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_392-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_393/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_393-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_393-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_394/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_394-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_394-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_395/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_395-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_395-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_396/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_396-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_396-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_397/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_397-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_397-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_398/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_398-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_398-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_399/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_399-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_399-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_39/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_39-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_39-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_3/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_3-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_3-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_400/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_400-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_400-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_401/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_401-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_401-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_402/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_402-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_402-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_403/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_403-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_403-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_404/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_404-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_404-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_405/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_405-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_405-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_406/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_406-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_406-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_407/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_407-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_407-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_408/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_408-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_408-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_409/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_409-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_409-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_40/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_40-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_40-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_410/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_410-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_410-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_411/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_411-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_411-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_412/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_412-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_412-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_413/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_413-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_413-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_414/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_414-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_414-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_415/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_415-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_415-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_416/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_416-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_416-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_417/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_417-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_417-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_418/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_418-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_418-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_419/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_419-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_419-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_41/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_41-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_41-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_420/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_420-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_420-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_421/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_421-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_421-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_422/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_422-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_422-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_423/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_423-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_423-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_424/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_424-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_424-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_425/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_425-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_425-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_426/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_426-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_426-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_427/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_427-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_427-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_428/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_428-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_428-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_429/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_429-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_429-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_42/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_42-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_42-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_430/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_430-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_430-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_431/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_431-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_431-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_432/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_432-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_432-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_433/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_433-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_433-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_434/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_434-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_434-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_435/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_435-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_435-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_436/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_436-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_436-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_437/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_437-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_437-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_438/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_438-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_438-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_439/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_439-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_439-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_43/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_43-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_43-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_440/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_440-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_440-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_441/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_441-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_441-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_442/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_442-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_442-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_443/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_443-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_443-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_444/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_444-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_444-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_445/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_445-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_445-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_446/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_446-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_446-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_447/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_447-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_447-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_448/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_448-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_448-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_449/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_449-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_449-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_44/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_44-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_44-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_450/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_450-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_450-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_451/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_451-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_451-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_452/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_452-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_452-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_453/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_453-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_453-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_454/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_454-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_454-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_455/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_455-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_455-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_45/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_45-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_45-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_46/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_46-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_46-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_47/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_47-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_47-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_48/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_48-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_48-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_49/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_49-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_49-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_4/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_4-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_4-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_50/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_50-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_50-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_51/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_51-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_51-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_52/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_52-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_52-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_53/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_53-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_53-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_54/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_54-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_54-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_55/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_55-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_55-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_56/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_56-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_56-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_57/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_57-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_57-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_58/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_58-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_58-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_59/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_59-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_59-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_5/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_5-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_5-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_60/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_60-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_60-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_61/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_61-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_61-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_62/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_62-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_62-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_63/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_63-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_63-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_64/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_64-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_64-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_65/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_65-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_65-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_66/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_66-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_66-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_67/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_67-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_67-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_68/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_68-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_68-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_69/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_69-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_69-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_6/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_6-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_6-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_70/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_70-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_70-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_71/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_71-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_71-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_72/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_72-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_72-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_73/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_73-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_73-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_74/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_74-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_74-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_75/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_75-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_75-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_76/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_76-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_76-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_77/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_77-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_77-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_78/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_78-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_78-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_79/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_79-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_79-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_7/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_7-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_7-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_80/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_80-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_80-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_81/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_81-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_81-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_82/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_82-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_82-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_83/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_83-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_83-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_84/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_84-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_84-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_85/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_85-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_85-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_86/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_86-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_86-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_87/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_87-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_87-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_88/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_88-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_88-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_89/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_89-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_89-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_8/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_8-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_8-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_90/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_90-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_90-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_91/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_91-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_91-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_92/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_92-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_92-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_93/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_93-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_93-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_94/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_94-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_94-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_95/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_95-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_95-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_96/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_96-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_96-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_97/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_97-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_97-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_98/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_98-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_98-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_99/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_99-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_99-guppy/sequencing_summary.txt
tombo preprocess annotate_raw_with_fastqs --processes 20 --overwrite --fast5-basedir single_fast5-output-FAW45643_05cfc757_be96c638_9/0 --fastq-filenames single_fast5-output-FAW45643_05cfc757_be96c638_9-guppy/all.fastq --sequencing-summary-filenames single_fast5-output-FAW45643_05cfc757_be96c638_9-guppy/sequencing_summary.txt