python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads0 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads0.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads1 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads1.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads10 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads10.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads11 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads11.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads12 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads12.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads13 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads13.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads14 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads14.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads15 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads15.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads16 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads16.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads17 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads17.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads18 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads18.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads19 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads19.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads2 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads2.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads20 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads20.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads21 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads21.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads22 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads22.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads23 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads23.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads24 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads24.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads25 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads25.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads26 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads26.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads27 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads27.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads28 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads28.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads29 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads29.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads3 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads3.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads30 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads30.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads31 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads31.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads32 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads32.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads33 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads33.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads34 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads34.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads35 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads35.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads36 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads36.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads37 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads37.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads38 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads38.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads39 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads39.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads4 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads4.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads40 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads40.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads41 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads41.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads42 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads42.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads43 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads43.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads44 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads44.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads45 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads45.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads46 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads46.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads47 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads47.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads48 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads48.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads49 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads49.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads5 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads5.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads50 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads50.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads51 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads51.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads52 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads52.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads53 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads53.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads54 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads54.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads55 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads55.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads56 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads56.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads57 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads57.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads58 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads58.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads59 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads59.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads6 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads6.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads60 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads60.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads61 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads61.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads62 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads62.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads63 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads63.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads64 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads64.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads64.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads65 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads65.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads65.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads66 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads66.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads66.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads67 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads67.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads67.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads68 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads68.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads68.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads69 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads69.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads69.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads7 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads7.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads70 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads70.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads70.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads71 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads71.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads71.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads72 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads72.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads72.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads73 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads73.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads73.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads74 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads74.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads74.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads75 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads75.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads75.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads76 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads76.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads76.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads77 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads77.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads77.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads78 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads78.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads78.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads79 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads79.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads79.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads8 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads8.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads80 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads80.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads80.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads81 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads81.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads81.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads82 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads82.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads82.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads83 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads83.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads83.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads84 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads84.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads84.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads85 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads85.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads85.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads86 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads86.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads86.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.5mC.tombo.m5C-only.reads9 0.5 pieces-barcode09.hg19.5mC.tombo.m5C-only.reads9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.5mC.tombo.m5C-only.reads9.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads0 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads0.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads1 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads1.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads10 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads10.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads11 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads11.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads12 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads12.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads13 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads13.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads14 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads14.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads15 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads15.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads16 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads16.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads17 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads17.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads18 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads18.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads19 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads19.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads2 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads2.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads20 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads20.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads21 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads21.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads22 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads22.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads23 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads23.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads24 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads24.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads25 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads25.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads26 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads26.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads27 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads27.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads28 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads28.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads29 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads29.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads3 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads3.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads30 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads30.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads31 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads31.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads32 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads32.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads33 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads33.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads34 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads34.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads35 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads35.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads36 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads36.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads37 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads37.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads38 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads38.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads39 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads39.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads4 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads4.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads40 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads40.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads41 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads41.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads42 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads42.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads43 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads43.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads44 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads44.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads45 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads45.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads46 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads46.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads47 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads47.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads48 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads48.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads49 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads49.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads5 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads5.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads50 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads50.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads51 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads51.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads52 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads52.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads53 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads53.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads54 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads54.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads55 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads55.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads56 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads56.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads57 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads57.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads58 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads58.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads59 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads59.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads6 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads6.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads60 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads60.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads61 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads61.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads62 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads62.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads63 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads63.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads64 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads64.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads64.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads65 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads65.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads65.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads66 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads66.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads66.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads67 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads67.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads67.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads68 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads68.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads68.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads69 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads69.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads69.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads7 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads7.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads70 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads70.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads70.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads71 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads71.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads71.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads72 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads72.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads72.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads73 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads73.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads73.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads74 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads74.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads74.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads75 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads75.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads75.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads76 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads76.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads76.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads77 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads77.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads77.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads78 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads78.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads78.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads79 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads79.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads79.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads8 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads8.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads80 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads80.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads80.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads81 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads81.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads81.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads82 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads82.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads82.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads83 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads83.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads83.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads84 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads84.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads84.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads85 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads85.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads85.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads86 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads86.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads86.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode09.hg19.6mA.tombo.m6A-only.reads9 0.5 pieces-barcode09.hg19.6mA.tombo.m6A-only.reads9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode09.hg19.6mA.tombo.m6A-only.reads9.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads0 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads0.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads1 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads1.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads10 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads10.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads11 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads11.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads12 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads12.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads13 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads13.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads14 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads14.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads15 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads15.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads16 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads16.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads17 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads17.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads18 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads18.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads19 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads19.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads2 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads2.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads20 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads20.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads21 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads21.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads22 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads22.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads23 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads23.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads24 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads24.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads25 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads25.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads26 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads26.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads27 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads27.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads28 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads28.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads29 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads29.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads3 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads3.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads30 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads30.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads31 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads31.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads32 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads32.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads33 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads33.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads34 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads34.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads35 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads35.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads36 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads36.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads37 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads37.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads38 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads38.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads39 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads39.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads4 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads4.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads40 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads40.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads41 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads41.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads42 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads42.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads43 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads43.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads44 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads44.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads45 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads45.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads46 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads46.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads47 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads47.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads48 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads48.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads49 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads49.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads5 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads5.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads50 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads50.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads51 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads51.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads52 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads52.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads53 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads53.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads54 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads54.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads55 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads55.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads56 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads56.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads57 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads57.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads58 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads58.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads59 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads59.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads6 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads6.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads60 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads60.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads61 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads61.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads62 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads62.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads63 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads63.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads64 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads64.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads64.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads65 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads65.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads65.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads66 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads66.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads66.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads67 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads67.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads67.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads68 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads68.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads68.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads69 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads69.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads69.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads7 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads7.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads70 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads70.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads70.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads71 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads71.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads71.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads72 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads72.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads72.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads73 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads73.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads73.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads74 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads74.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads74.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads75 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads75.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads75.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads76 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads76.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads76.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads77 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads77.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads77.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads78 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads78.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads78.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads79 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads79.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads79.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads8 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads8.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads80 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads80.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads80.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads81 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads81.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads81.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads82 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads82.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads82.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads83 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads83.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads83.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads84 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads84.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads84.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads85 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads85.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads85.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads86 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads86.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads86.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads87 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads87.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads87.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads88 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads88.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads88.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads89 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads89.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads89.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads9 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads9.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads90 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads90.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads90.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.5mC.tombo.m5C-only.reads91 0.5 pieces-barcode10.hg19.5mC.tombo.m5C-only.reads91.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.5mC.tombo.m5C-only.reads91.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads0 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads0.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads1 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads1.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads10 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads10.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads11 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads11.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads12 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads12.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads13 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads13.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads14 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads14.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads15 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads15.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads16 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads16.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads17 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads17.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads18 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads18.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads19 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads19.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads2 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads2.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads20 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads20.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads21 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads21.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads22 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads22.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads23 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads23.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads24 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads24.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads25 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads25.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads26 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads26.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads27 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads27.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads28 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads28.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads29 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads29.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads3 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads3.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads30 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads30.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads31 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads31.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads32 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads32.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads33 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads33.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads34 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads34.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads35 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads35.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads36 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads36.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads37 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads37.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads38 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads38.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads39 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads39.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads4 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads4.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads40 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads40.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads41 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads41.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads42 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads42.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads43 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads43.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads44 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads44.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads45 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads45.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads46 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads46.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads47 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads47.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads48 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads48.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads49 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads49.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads5 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads5.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads50 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads50.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads51 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads51.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads52 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads52.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads53 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads53.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads54 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads54.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads55 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads55.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads56 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads56.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads57 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads57.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads58 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads58.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads59 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads59.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads6 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads6.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads60 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads60.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads61 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads61.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads62 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads62.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads63 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads63.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads64 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads64.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads64.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads65 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads65.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads65.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads66 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads66.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads66.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads67 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads67.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads67.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads68 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads68.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads68.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads69 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads69.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads69.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads7 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads7.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads70 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads70.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads70.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads71 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads71.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads71.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads72 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads72.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads72.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads73 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads73.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads73.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads74 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads74.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads74.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads75 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads75.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads75.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads76 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads76.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads76.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads77 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads77.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads77.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads78 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads78.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads78.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads79 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads79.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads79.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads8 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads8.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads80 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads80.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads80.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads81 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads81.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads81.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads82 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads82.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads82.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads83 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads83.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads83.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads84 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads84.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads84.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads85 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads85.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads85.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads86 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads86.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads86.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads87 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads87.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads87.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads88 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads88.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads88.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads89 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads89.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads89.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads9 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads9.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads90 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads90.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads90.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode10.hg19.6mA.tombo.m6A-only.reads91 0.5 pieces-barcode10.hg19.6mA.tombo.m6A-only.reads91.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode10.hg19.6mA.tombo.m6A-only.reads91.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads0 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads0.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads1 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads1.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads10 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads10.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads100 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads100.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads100.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads101 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads101.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads101.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads102 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads102.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads102.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads103 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads103.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads103.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads104 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads104.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads104.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads105 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads105.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads105.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads106 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads106.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads106.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads107 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads107.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads107.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads108 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads108.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads108.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads109 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads109.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads109.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads11 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads11.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads110 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads110.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads110.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads111 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads111.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads111.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads112 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads112.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads112.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads113 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads113.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads113.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads114 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads114.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads114.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads115 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads115.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads115.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads116 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads116.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads116.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads117 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads117.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads117.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads118 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads118.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads118.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads119 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads119.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads119.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads12 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads12.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads120 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads120.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads120.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads121 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads121.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads121.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads122 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads122.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads122.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads123 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads123.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads123.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads124 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads124.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads124.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads125 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads125.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads125.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads126 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads126.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads126.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads127 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads127.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads127.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads128 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads128.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads128.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads129 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads129.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads129.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads13 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads13.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads130 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads130.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads130.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads131 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads131.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads131.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads132 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads132.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads132.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads133 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads133.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads133.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads134 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads134.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads134.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads135 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads135.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads135.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads136 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads136.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads136.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads137 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads137.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads137.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads138 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads138.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads138.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads139 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads139.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads139.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads14 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads14.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads140 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads140.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads140.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads141 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads141.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads141.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads142 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads142.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads142.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads143 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads143.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads143.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads144 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads144.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads144.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads145 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads145.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads145.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads146 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads146.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads146.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads147 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads147.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads147.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads148 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads148.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads148.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads149 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads149.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads149.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads15 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads15.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads150 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads150.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads150.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads151 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads151.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads151.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads152 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads152.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads152.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads16 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads16.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads17 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads17.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads18 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads18.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads19 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads19.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads2 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads2.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads20 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads20.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads21 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads21.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads22 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads22.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads23 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads23.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads24 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads24.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads25 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads25.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads26 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads26.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads27 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads27.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads28 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads28.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads29 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads29.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads3 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads3.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads30 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads30.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads31 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads31.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads32 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads32.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads33 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads33.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads34 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads34.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads35 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads35.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads36 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads36.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads37 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads37.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads38 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads38.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads39 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads39.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads4 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads4.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads40 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads40.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads41 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads41.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads42 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads42.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads43 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads43.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads44 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads44.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads45 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads45.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads46 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads46.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads47 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads47.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads48 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads48.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads49 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads49.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads5 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads5.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads50 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads50.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads51 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads51.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads52 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads52.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads53 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads53.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads54 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads54.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads55 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads55.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads56 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads56.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads57 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads57.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads58 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads58.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads59 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads59.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads6 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads6.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads60 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads60.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads61 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads61.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads62 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads62.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads63 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads63.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads64 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads64.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads64.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads65 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads65.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads65.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads66 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads66.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads66.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads67 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads67.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads67.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads68 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads68.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads68.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads69 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads69.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads69.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads7 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads7.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads70 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads70.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads70.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads71 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads71.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads71.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads72 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads72.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads72.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads73 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads73.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads73.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads74 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads74.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads74.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads75 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads75.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads75.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads76 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads76.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads76.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads77 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads77.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads77.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads78 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads78.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads78.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads79 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads79.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads79.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads8 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads8.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads80 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads80.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads80.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads81 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads81.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads81.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads82 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads82.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads82.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads83 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads83.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads83.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads84 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads84.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads84.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads85 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads85.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads85.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads86 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads86.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads86.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads87 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads87.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads87.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads88 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads88.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads88.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads89 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads89.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads89.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads9 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads9.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads90 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads90.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads90.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads91 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads91.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads91.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads92 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads92.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads92.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads93 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads93.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads93.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads94 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads94.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads94.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads95 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads95.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads95.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads96 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads96.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads96.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads97 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads97.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads97.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads98 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads98.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads98.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.5mC.tombo.m5C-only.reads99 0.5 pieces-barcode11.hg19.5mC.tombo.m5C-only.reads99.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.5mC.tombo.m5C-only.reads99.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads0 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads0.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads1 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads1.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads10 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads10.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads100 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads100.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads100.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads101 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads101.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads101.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads102 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads102.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads102.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads103 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads103.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads103.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads104 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads104.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads104.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads105 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads105.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads105.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads106 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads106.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads106.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads107 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads107.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads107.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads108 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads108.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads108.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads109 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads109.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads109.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads11 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads11.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads110 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads110.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads110.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads111 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads111.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads111.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads112 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads112.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads112.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads113 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads113.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads113.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads114 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads114.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads114.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads115 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads115.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads115.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads116 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads116.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads116.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads117 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads117.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads117.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads118 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads118.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads118.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads119 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads119.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads119.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads12 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads12.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads120 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads120.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads120.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads121 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads121.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads121.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads122 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads122.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads122.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads123 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads123.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads123.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads124 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads124.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads124.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads125 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads125.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads125.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads126 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads126.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads126.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads127 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads127.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads127.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads128 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads128.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads128.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads129 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads129.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads129.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads13 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads13.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads130 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads130.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads130.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads131 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads131.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads131.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads132 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads132.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads132.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads133 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads133.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads133.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads134 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads134.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads134.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads135 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads135.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads135.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads136 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads136.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads136.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads137 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads137.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads137.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads138 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads138.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads138.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads139 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads139.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads139.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads14 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads14.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads140 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads140.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads140.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads141 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads141.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads141.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads142 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads142.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads142.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads143 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads143.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads143.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads144 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads144.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads144.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads145 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads145.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads145.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads146 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads146.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads146.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads147 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads147.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads147.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads148 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads148.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads148.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads149 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads149.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads149.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads15 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads15.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads150 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads150.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads150.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads151 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads151.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads151.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads152 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads152.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads152.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads16 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads16.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads17 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads17.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads18 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads18.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads19 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads19.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads2 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads2.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads20 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads20.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads21 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads21.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads22 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads22.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads23 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads23.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads24 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads24.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads25 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads25.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads26 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads26.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads27 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads27.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads28 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads28.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads29 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads29.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads3 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads3.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads30 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads30.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads31 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads31.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads32 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads32.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads33 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads33.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads34 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads34.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads35 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads35.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads36 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads36.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads37 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads37.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads38 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads38.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads39 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads39.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads4 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads4.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads40 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads40.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads41 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads41.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads42 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads42.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads43 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads43.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads44 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads44.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads45 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads45.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads46 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads46.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads47 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads47.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads48 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads48.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads49 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads49.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads5 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads5.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads50 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads50.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads51 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads51.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads52 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads52.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads53 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads53.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads54 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads54.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads55 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads55.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads56 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads56.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads57 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads57.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads58 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads58.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads59 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads59.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads6 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads6.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads60 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads60.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads61 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads61.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads62 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads62.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads63 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads63.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads64 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads64.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads64.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads65 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads65.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads65.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads66 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads66.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads66.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads67 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads67.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads67.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads68 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads68.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads68.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads69 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads69.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads69.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads7 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads7.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads70 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads70.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads70.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads71 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads71.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads71.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads72 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads72.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads72.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads73 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads73.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads73.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads74 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads74.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads74.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads75 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads75.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads75.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads76 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads76.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads76.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads77 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads77.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads77.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads78 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads78.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads78.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads79 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads79.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads79.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads8 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads8.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads80 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads80.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads80.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads81 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads81.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads81.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads82 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads82.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads82.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads83 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads83.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads83.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads84 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads84.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads84.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads85 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads85.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads85.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads86 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads86.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads86.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads87 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads87.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads87.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads88 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads88.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads88.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads89 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads89.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads89.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads9 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads9.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads90 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads90.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads90.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads91 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads91.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads91.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads92 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads92.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads92.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads93 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads93.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads93.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads94 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads94.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads94.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads95 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads95.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads95.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads96 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads96.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads96.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads97 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads97.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads97.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads98 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads98.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads98.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode11.hg19.6mA.tombo.m6A-only.reads99 0.5 pieces-barcode11.hg19.6mA.tombo.m6A-only.reads99.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode11.hg19.6mA.tombo.m6A-only.reads99.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads0 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads0.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads1 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads1.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads10 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads10.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads100 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads100.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads100.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads101 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads101.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads101.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads102 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads102.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads102.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads103 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads103.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads103.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads104 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads104.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads104.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads105 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads105.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads105.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads106 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads106.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads106.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads107 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads107.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads107.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads108 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads108.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads108.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads109 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads109.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads109.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads11 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads11.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads110 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads110.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads110.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads111 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads111.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads111.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads112 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads112.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads112.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads113 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads113.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads113.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads114 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads114.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads114.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads115 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads115.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads115.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads116 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads116.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads116.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads117 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads117.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads117.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads118 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads118.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads118.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads119 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads119.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads119.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads12 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads12.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads120 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads120.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads120.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads121 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads121.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads121.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads122 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads122.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads122.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads123 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads123.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads123.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads124 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads124.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads124.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads125 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads125.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads125.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads126 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads126.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads126.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads127 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads127.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads127.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads128 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads128.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads128.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads129 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads129.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads129.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads13 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads13.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads130 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads130.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads130.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads131 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads131.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads131.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads132 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads132.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads132.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads133 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads133.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads133.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads134 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads134.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads134.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads14 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads14.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads15 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads15.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads16 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads16.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads17 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads17.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads18 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads18.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads19 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads19.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads2 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads2.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads20 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads20.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads21 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads21.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads22 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads22.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads23 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads23.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads24 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads24.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads25 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads25.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads26 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads26.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads27 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads27.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads28 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads28.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads29 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads29.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads3 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads3.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads30 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads30.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads31 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads31.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads32 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads32.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads33 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads33.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads34 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads34.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads35 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads35.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads36 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads36.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads37 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads37.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads38 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads38.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads39 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads39.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads4 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads4.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads40 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads40.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads41 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads41.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads42 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads42.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads43 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads43.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads44 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads44.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads45 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads45.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads46 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads46.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads47 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads47.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads48 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads48.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads49 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads49.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads5 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads5.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads50 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads50.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads51 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads51.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads52 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads52.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads53 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads53.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads54 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads54.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads55 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads55.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads56 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads56.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads57 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads57.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads58 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads58.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads59 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads59.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads6 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads6.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads60 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads60.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads61 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads61.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads62 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads62.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads63 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads63.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads64 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads64.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads64.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads65 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads65.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads65.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads66 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads66.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads66.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads67 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads67.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads67.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads68 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads68.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads68.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads69 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads69.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads69.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads7 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads7.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads70 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads70.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads70.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads71 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads71.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads71.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads72 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads72.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads72.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads73 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads73.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads73.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads74 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads74.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads74.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads75 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads75.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads75.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads76 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads76.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads76.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads77 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads77.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads77.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads78 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads78.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads78.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads79 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads79.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads79.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads8 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads8.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads80 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads80.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads80.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads81 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads81.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads81.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads82 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads82.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads82.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads83 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads83.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads83.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads84 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads84.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads84.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads85 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads85.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads85.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads86 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads86.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads86.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads87 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads87.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads87.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads88 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads88.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads88.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads89 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads89.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads89.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads9 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads9.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads90 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads90.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads90.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads91 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads91.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads91.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads92 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads92.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads92.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads93 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads93.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads93.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads94 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads94.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads94.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads95 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads95.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads95.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads96 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads96.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads96.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads97 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads97.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads97.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads98 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads98.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads98.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.5mC.tombo.m5C-only.reads99 0.5 pieces-barcode12.hg19.5mC.tombo.m5C-only.reads99.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.5mC.tombo.m5C-only.reads99.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads0 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads0.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads1 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads1.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads10 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads10.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads100 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads100.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads100.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads101 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads101.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads101.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads102 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads102.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads102.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads103 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads103.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads103.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads104 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads104.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads104.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads105 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads105.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads105.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads106 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads106.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads106.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads107 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads107.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads107.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads108 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads108.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads108.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads109 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads109.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads109.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads11 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads11.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads110 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads110.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads110.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads111 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads111.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads111.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads112 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads112.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads112.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads113 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads113.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads113.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads114 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads114.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads114.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads115 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads115.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads115.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads116 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads116.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads116.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads117 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads117.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads117.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads118 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads118.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads118.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads119 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads119.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads119.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads12 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads12.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads120 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads120.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads120.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads121 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads121.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads121.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads122 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads122.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads122.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads123 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads123.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads123.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads124 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads124.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads124.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads125 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads125.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads125.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads126 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads126.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads126.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads127 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads127.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads127.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads128 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads128.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads128.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads129 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads129.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads129.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads13 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads13.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads130 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads130.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads130.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads131 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads131.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads131.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads132 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads132.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads132.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads133 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads133.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads133.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads134 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads134.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads134.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads14 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads14.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads15 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads15.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads16 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads16.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads17 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads17.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads18 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads18.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads19 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads19.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads2 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads2.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads20 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads20.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads21 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads21.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads22 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads22.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads23 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads23.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads24 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads24.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads25 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads25.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads26 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads26.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads27 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads27.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads28 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads28.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads29 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads29.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads3 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads3.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads30 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads30.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads31 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads31.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads32 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads32.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads33 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads33.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads34 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads34.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads35 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads35.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads36 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads36.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads37 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads37.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads38 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads38.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads39 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads39.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads4 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads4.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads40 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads40.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads41 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads41.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads42 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads42.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads43 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads43.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads44 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads44.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads45 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads45.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads46 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads46.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads47 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads47.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads48 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads48.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads49 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads49.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads5 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads5.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads50 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads50.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads51 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads51.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads52 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads52.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads53 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads53.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads54 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads54.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads55 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads55.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads56 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads56.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads57 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads57.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads58 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads58.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads59 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads59.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads6 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads6.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads60 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads60.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads61 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads61.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads62 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads62.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads63 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads63.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads64 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads64.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads64.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads65 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads65.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads65.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads66 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads66.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads66.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads67 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads67.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads67.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads68 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads68.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads68.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads69 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads69.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads69.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads7 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads7.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads70 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads70.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads70.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads71 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads71.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads71.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads72 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads72.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads72.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads73 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads73.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads73.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads74 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads74.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads74.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads75 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads75.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads75.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads76 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads76.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads76.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads77 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads77.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads77.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads78 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads78.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads78.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads79 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads79.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads79.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads8 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads8.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads80 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads80.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads80.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads81 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads81.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads81.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads82 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads82.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads82.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads83 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads83.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads83.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads84 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads84.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads84.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads85 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads85.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads85.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads86 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads86.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads86.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads87 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads87.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads87.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads88 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads88.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads88.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads89 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads89.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads89.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads9 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads9.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads90 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads90.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads90.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads91 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads91.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads91.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads92 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads92.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads92.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads93 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads93.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads93.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads94 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads94.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads94.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads95 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads95.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads95.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads96 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads96.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads96.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads97 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads97.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads97.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads98 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads98.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads98.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-barcode12.hg19.6mA.tombo.m6A-only.reads99 0.5 pieces-barcode12.hg19.6mA.tombo.m6A-only.reads99.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-barcode12.hg19.6mA.tombo.m6A-only.reads99.BI_w10_a10_b10.reads.tsv