python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.0.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.0.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.0.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.100.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.100.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.100.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.101.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.101.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.101.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.102.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.102.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.102.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.103.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.103.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.103.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.104.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.104.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.104.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.105.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.105.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.105.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.106.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.106.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.106.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.107.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.107.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.107.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.108.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.108.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.108.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.109.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.109.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.109.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.10.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.10.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.10.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.110.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.110.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.110.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.111.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.111.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.111.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.112.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.112.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.112.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.113.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.113.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.113.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.114.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.114.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.114.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.115.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.115.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.115.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.116.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.116.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.116.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.117.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.117.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.117.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.118.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.118.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.118.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.119.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.119.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.119.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.11.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.11.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.11.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.120.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.120.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.120.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.121.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.121.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.121.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.122.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.122.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.122.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.123.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.123.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.123.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.124.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.124.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.124.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.125.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.125.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.125.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.126.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.126.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.126.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.127.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.127.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.127.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.128.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.128.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.128.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.129.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.129.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.129.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.12.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.12.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.12.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.130.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.130.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.130.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.131.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.131.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.131.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.132.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.132.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.132.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.133.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.133.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.133.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.134.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.134.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.134.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.135.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.135.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.135.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.136.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.136.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.136.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.137.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.137.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.137.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.138.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.138.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.138.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.139.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.139.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.139.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.13.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.13.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.13.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.140.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.140.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.140.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.141.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.141.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.141.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.142.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.142.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.142.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.143.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.143.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.143.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.144.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.144.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.144.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.145.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.145.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.145.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.146.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.146.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.146.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.147.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.147.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.147.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.148.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.148.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.148.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.149.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.149.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.149.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.14.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.14.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.14.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.150.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.150.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.150.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.151.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.151.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.151.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.152.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.152.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.152.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.153.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.153.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.153.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.154.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.154.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.154.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.155.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.155.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.155.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.156.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.156.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.156.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.157.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.157.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.157.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.158.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.158.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.158.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.159.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.159.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.159.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.15.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.15.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.15.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.160.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.160.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.160.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.161.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.161.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.161.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.162.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.162.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.162.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.163.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.163.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.163.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.164.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.164.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.164.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.165.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.165.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.165.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.166.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.166.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.166.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.167.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.167.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.167.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.168.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.168.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.168.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.169.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.169.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.169.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.16.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.16.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.16.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.170.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.170.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.170.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.171.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.171.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.171.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.172.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.172.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.172.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.173.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.173.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.173.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.174.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.174.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.174.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.175.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.175.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.175.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.176.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.176.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.176.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.177.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.177.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.177.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.178.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.178.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.178.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.179.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.179.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.179.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.17.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.17.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.17.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.180.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.180.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.180.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.181.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.181.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.181.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.182.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.182.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.182.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.183.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.183.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.183.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.184.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.184.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.184.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.185.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.185.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.185.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.186.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.186.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.186.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.187.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.187.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.187.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.188.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.188.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.188.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.189.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.189.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.189.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.18.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.18.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.18.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.190.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.190.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.190.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.191.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.191.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.191.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.192.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.192.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.192.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.193.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.193.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.193.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.194.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.194.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.194.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.195.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.195.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.195.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.196.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.196.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.196.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.197.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.197.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.197.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.198.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.198.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.198.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.199.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.199.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.199.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.19.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.19.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.19.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.1.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.1.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.1.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.200.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.200.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.200.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.201.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.201.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.201.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.202.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.202.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.202.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.203.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.203.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.203.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.204.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.204.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.204.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.205.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.205.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.205.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.206.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.206.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.206.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.207.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.207.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.207.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.208.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.208.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.208.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.209.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.209.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.209.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.20.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.20.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.20.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.210.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.210.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.210.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.211.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.211.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.211.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.212.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.212.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.212.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.213.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.213.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.213.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.214.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.214.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.214.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.215.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.215.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.215.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.216.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.216.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.216.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.217.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.217.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.217.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.218.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.218.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.218.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.219.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.219.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.219.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.21.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.21.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.21.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.220.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.220.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.220.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.221.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.221.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.221.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.222.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.222.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.222.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.223.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.223.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.223.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.224.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.224.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.224.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.225.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.225.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.225.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.226.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.226.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.226.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.227.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.227.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.227.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.228.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.228.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.228.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.229.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.229.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.229.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.22.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.22.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.22.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.230.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.230.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.230.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.231.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.231.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.231.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.232.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.232.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.232.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.233.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.233.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.233.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.234.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.234.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.234.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.235.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.235.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.235.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.236.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.236.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.236.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.237.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.237.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.237.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.238.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.238.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.238.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.239.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.239.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.239.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.23.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.23.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.23.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.240.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.240.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.240.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.241.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.241.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.241.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.242.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.242.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.242.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.243.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.243.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.243.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.244.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.244.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.244.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.245.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.245.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.245.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.246.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.246.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.246.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.247.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.247.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.247.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.248.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.248.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.248.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.249.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.249.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.249.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.24.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.24.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.24.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.250.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.250.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.250.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.251.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.251.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.251.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.252.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.252.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.252.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.253.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.253.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.253.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.254.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.254.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.254.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.255.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.255.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.255.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.256.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.256.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.256.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.257.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.257.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.257.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.258.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.258.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.258.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.259.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.259.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.259.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.25.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.25.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.25.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.260.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.260.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.260.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.261.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.261.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.261.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.262.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.262.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.262.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.263.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.263.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.263.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.264.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.264.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.264.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.265.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.265.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.265.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.266.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.266.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.266.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.267.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.267.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.267.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.268.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.268.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.268.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.269.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.269.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.269.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.26.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.26.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.26.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.270.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.270.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.270.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.271.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.271.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.271.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.272.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.272.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.272.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.273.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.273.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.273.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.274.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.274.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.274.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.275.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.275.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.275.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.276.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.276.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.276.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.277.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.277.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.277.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.278.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.278.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.278.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.279.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.279.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.279.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.27.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.27.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.27.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.280.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.280.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.280.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.281.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.281.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.281.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.282.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.282.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.282.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.283.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.283.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.283.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.284.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.284.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.284.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.285.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.285.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.285.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.286.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.286.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.286.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.287.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.287.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.287.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.288.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.288.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.288.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.289.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.289.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.289.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.28.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.28.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.28.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.290.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.290.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.290.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.291.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.291.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.291.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.292.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.292.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.292.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.293.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.293.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.293.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.294.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.294.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.294.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.295.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.295.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.295.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.296.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.296.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.296.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.297.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.297.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.297.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.298.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.298.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.298.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.299.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.299.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.299.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.29.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.29.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.29.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.2.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.2.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.2.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.300.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.300.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.300.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.301.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.301.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.301.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.302.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.302.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.302.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.303.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.303.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.303.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.304.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.304.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.304.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.305.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.305.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.305.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.306.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.306.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.306.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.307.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.307.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.307.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.308.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.308.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.308.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.309.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.309.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.309.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.30.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.30.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.30.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.310.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.310.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.310.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.311.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.311.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.311.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.312.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.312.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.312.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.313.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.313.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.313.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.314.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.314.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.314.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.315.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.315.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.315.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.316.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.316.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.316.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.317.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.317.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.317.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.318.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.318.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.318.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.319.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.319.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.319.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.31.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.31.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.31.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.320.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.320.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.320.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.321.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.321.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.321.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.322.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.322.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.322.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.323.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.323.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.323.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.324.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.324.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.324.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.325.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.325.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.325.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.326.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.326.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.326.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.327.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.327.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.327.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.328.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.328.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.328.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.329.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.329.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.329.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.32.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.32.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.32.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.330.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.330.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.330.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.331.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.331.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.331.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.332.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.332.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.332.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.333.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.333.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.333.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.334.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.334.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.334.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.335.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.335.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.335.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.336.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.336.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.336.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.337.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.337.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.337.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.338.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.338.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.338.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.339.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.339.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.339.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.33.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.33.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.33.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.340.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.340.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.340.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.341.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.341.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.341.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.342.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.342.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.342.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.343.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.343.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.343.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.344.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.344.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.344.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.345.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.345.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.345.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.346.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.346.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.346.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.347.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.347.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.347.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.348.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.348.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.348.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.349.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.349.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.349.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.34.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.34.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.34.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.350.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.350.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.350.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.351.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.351.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.351.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.352.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.352.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.352.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.353.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.353.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.353.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.354.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.354.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.354.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.355.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.355.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.355.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.356.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.356.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.356.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.357.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.357.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.357.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.358.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.358.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.358.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.359.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.359.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.359.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.35.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.35.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.35.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.360.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.360.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.360.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.361.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.361.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.361.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.362.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.362.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.362.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.363.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.363.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.363.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.364.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.364.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.364.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.365.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.365.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.365.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.366.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.366.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.366.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.367.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.367.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.367.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.368.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.368.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.368.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.369.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.369.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.369.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.36.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.36.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.36.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.370.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.370.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.370.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.371.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.371.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.371.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.372.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.372.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.372.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.373.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.373.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.373.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.374.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.374.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.374.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.375.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.375.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.375.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.376.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.376.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.376.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.377.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.377.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.377.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.378.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.378.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.378.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.379.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.379.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.379.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.37.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.37.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.37.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.380.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.380.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.380.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.381.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.381.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.381.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.382.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.382.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.382.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.383.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.383.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.383.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.384.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.384.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.384.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.385.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.385.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.385.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.386.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.386.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.386.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.387.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.387.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.387.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.388.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.388.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.388.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.389.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.389.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.389.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.38.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.38.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.38.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.390.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.390.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.390.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.391.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.391.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.391.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.392.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.392.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.392.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.393.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.393.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.393.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.394.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.394.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.394.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.395.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.395.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.395.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.396.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.396.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.396.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.397.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.397.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.397.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.398.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.398.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.398.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.399.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.399.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.399.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.39.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.39.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.39.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.3.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.3.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.3.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.400.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.400.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.400.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.401.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.401.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.401.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.402.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.402.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.402.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.403.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.403.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.403.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.404.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.404.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.404.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.405.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.405.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.405.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.406.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.406.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.406.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.407.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.407.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.407.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.408.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.408.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.408.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.409.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.409.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.409.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.40.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.40.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.40.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.410.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.410.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.410.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.411.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.411.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.411.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.412.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.412.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.412.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.413.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.413.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.413.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.414.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.414.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.414.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.415.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.415.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.415.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.416.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.416.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.416.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.417.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.417.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.417.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.418.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.418.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.418.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.419.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.419.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.419.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.41.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.41.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.41.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.420.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.420.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.420.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.421.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.421.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.421.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.422.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.422.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.422.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.423.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.423.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.423.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.424.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.424.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.424.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.425.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.425.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.425.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.426.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.426.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.426.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.427.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.427.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.427.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.428.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.428.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.428.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.429.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.429.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.429.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.42.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.42.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.42.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.430.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.430.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.430.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.431.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.431.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.431.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.432.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.432.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.432.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.433.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.433.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.433.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.434.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.434.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.434.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.435.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.435.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.435.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.436.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.436.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.436.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.437.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.437.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.437.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.438.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.438.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.438.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.439.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.439.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.439.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.43.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.43.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.43.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.440.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.440.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.440.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.441.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.441.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.441.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.442.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.442.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.442.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.443.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.443.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.443.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.444.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.444.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.444.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.445.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.445.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.445.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.446.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.446.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.446.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.447.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.447.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.447.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.448.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.448.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.448.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.449.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.449.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.449.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.44.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.44.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.44.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.450.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.450.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.450.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.451.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.451.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.451.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.452.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.452.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.452.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.453.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.453.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.453.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.454.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.454.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.454.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.455.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.455.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.455.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.456.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.456.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.456.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.457.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.457.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.457.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.458.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.458.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.458.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.459.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.459.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.459.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.45.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.45.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.45.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.460.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.460.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.460.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.461.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.461.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.461.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.462.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.462.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.462.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.463.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.463.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.463.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.464.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.464.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.464.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.465.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.465.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.465.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.466.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.466.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.466.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.467.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.467.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.467.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.468.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.468.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.468.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.469.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.469.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.469.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.46.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.46.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.46.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.470.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.470.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.470.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.471.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.471.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.471.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.472.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.472.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.472.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.473.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.473.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.473.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.474.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.474.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.474.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.475.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.475.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.475.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.476.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.476.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.476.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.477.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.477.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.477.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.478.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.478.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.478.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.479.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.479.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.479.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.47.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.47.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.47.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.480.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.480.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.480.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.481.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.481.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.481.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.482.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.482.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.482.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.483.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.483.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.483.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.484.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.484.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.484.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.485.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.485.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.485.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.486.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.486.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.486.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.487.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.487.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.487.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.488.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.488.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.488.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.489.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.489.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.489.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.48.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.48.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.48.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.49.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.49.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.49.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.4.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.4.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.4.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.50.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.50.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.50.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.51.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.51.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.51.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.52.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.52.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.52.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.53.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.53.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.53.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.54.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.54.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.54.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.55.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.55.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.55.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.56.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.56.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.56.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.57.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.57.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.57.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.58.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.58.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.58.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.59.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.59.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.59.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.5.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.5.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.5.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.60.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.60.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.60.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.61.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.61.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.61.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.62.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.62.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.62.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.63.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.63.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.63.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.64.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.64.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.64.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.65.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.65.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.65.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.66.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.66.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.66.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.67.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.67.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.67.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.68.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.68.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.68.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.69.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.69.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.69.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.6.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.6.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.6.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.70.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.70.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.70.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.71.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.71.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.71.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.72.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.72.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.72.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.73.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.73.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.73.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.74.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.74.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.74.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.75.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.75.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.75.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.76.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.76.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.76.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.77.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.77.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.77.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.78.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.78.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.78.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.79.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.79.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.79.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.7.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.7.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.7.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.80.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.80.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.80.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.81.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.81.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.81.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.82.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.82.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.82.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.83.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.83.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.83.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.84.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.84.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.84.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.85.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.85.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.85.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.86.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.86.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.86.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.87.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.87.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.87.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.88.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.88.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.88.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.89.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.89.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.89.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.8.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.8.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.8.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.90.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.90.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.90.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.91.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.91.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.91.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.92.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.92.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.92.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.93.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.93.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.93.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.94.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.94.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.94.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.95.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.95.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.95.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.96.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.96.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.96.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.97.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.97.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.97.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.98.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.98.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.98.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.99.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.99.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.99.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_09_04_S2_SMAC_seq_m6A_only.9.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019_09_04_S2_SMAC_seq_m6A_only.9.tombo.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_09_04_S2_SMAC_seq_m6A_only.9.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv