python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G0 0.5 pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G0.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G1 0.5 pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G1.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G10 0.5 pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G10.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G11 0.5 pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G11.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G12 0.5 pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G12.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G13 0.5 pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G13.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G2 0.5 pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G2.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G3 0.5 pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G3.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G4 0.5 pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G4.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G5 0.5 pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G5.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G6 0.5 pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G6.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G7 0.5 pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G7.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G8 0.5 pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G8.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G9 0.5 pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.generic-A-C-T-G9.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.T-only0 0.5 pieces-2019_02_27_Kmno4_minus.T-only0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.T-only0.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.T-only1 0.5 pieces-2019_02_27_Kmno4_minus.T-only1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.T-only1.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.T-only10 0.5 pieces-2019_02_27_Kmno4_minus.T-only10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.T-only10.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.T-only11 0.5 pieces-2019_02_27_Kmno4_minus.T-only11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.T-only11.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.T-only12 0.5 pieces-2019_02_27_Kmno4_minus.T-only12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.T-only12.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.T-only13 0.5 pieces-2019_02_27_Kmno4_minus.T-only13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.T-only13.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.T-only2 0.5 pieces-2019_02_27_Kmno4_minus.T-only2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.T-only2.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.T-only3 0.5 pieces-2019_02_27_Kmno4_minus.T-only3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.T-only3.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.T-only4 0.5 pieces-2019_02_27_Kmno4_minus.T-only4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.T-only4.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.T-only5 0.5 pieces-2019_02_27_Kmno4_minus.T-only5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.T-only5.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.T-only6 0.5 pieces-2019_02_27_Kmno4_minus.T-only6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.T-only6.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.T-only7 0.5 pieces-2019_02_27_Kmno4_minus.T-only7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.T-only7.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.T-only8 0.5 pieces-2019_02_27_Kmno4_minus.T-only8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.T-only8.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_minus.T-only9 0.5 pieces-2019_02_27_Kmno4_minus.T-only9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_minus.T-only9.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G0 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G0.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G1 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G1.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G10 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G10.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G11 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G11.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G12 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G12.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G13 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G13.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G14 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G14.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G15 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G15.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G16 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G16.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G17 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G17.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G18 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G18.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G19 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G19.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G2 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G2.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G20 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G20.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G21 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G21.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G22 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G22.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G23 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G23.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G24 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G24.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G25 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G25.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G26 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G26.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G27 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G27.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G28 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G28.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G29 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G29.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G3 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G3.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G30 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G30.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G31 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G31.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G32 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G32.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G33 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G33.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G34 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G34.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G4 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G4.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G5 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G5.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G6 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G6.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G7 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G7.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G8 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G8.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G9 0.5 pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.generic-A-C-T-G9.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only0 0.5 pieces-2019_02_27_Kmno4_plus.T-only0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only0.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only1 0.5 pieces-2019_02_27_Kmno4_plus.T-only1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only1.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only10 0.5 pieces-2019_02_27_Kmno4_plus.T-only10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only10.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only11 0.5 pieces-2019_02_27_Kmno4_plus.T-only11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only11.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only12 0.5 pieces-2019_02_27_Kmno4_plus.T-only12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only12.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only13 0.5 pieces-2019_02_27_Kmno4_plus.T-only13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only13.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only14 0.5 pieces-2019_02_27_Kmno4_plus.T-only14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only14.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only15 0.5 pieces-2019_02_27_Kmno4_plus.T-only15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only15.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only16 0.5 pieces-2019_02_27_Kmno4_plus.T-only16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only16.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only17 0.5 pieces-2019_02_27_Kmno4_plus.T-only17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only17.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only18 0.5 pieces-2019_02_27_Kmno4_plus.T-only18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only18.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only19 0.5 pieces-2019_02_27_Kmno4_plus.T-only19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only19.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only2 0.5 pieces-2019_02_27_Kmno4_plus.T-only2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only2.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only20 0.5 pieces-2019_02_27_Kmno4_plus.T-only20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only20.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only21 0.5 pieces-2019_02_27_Kmno4_plus.T-only21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only21.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only22 0.5 pieces-2019_02_27_Kmno4_plus.T-only22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only22.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only23 0.5 pieces-2019_02_27_Kmno4_plus.T-only23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only23.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only24 0.5 pieces-2019_02_27_Kmno4_plus.T-only24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only24.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only25 0.5 pieces-2019_02_27_Kmno4_plus.T-only25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only25.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only26 0.5 pieces-2019_02_27_Kmno4_plus.T-only26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only26.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only27 0.5 pieces-2019_02_27_Kmno4_plus.T-only27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only27.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only28 0.5 pieces-2019_02_27_Kmno4_plus.T-only28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only28.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only29 0.5 pieces-2019_02_27_Kmno4_plus.T-only29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only29.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only3 0.5 pieces-2019_02_27_Kmno4_plus.T-only3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only3.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only30 0.5 pieces-2019_02_27_Kmno4_plus.T-only30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only30.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only31 0.5 pieces-2019_02_27_Kmno4_plus.T-only31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only31.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only32 0.5 pieces-2019_02_27_Kmno4_plus.T-only32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only32.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only33 0.5 pieces-2019_02_27_Kmno4_plus.T-only33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only33.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only34 0.5 pieces-2019_02_27_Kmno4_plus.T-only34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only34.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only4 0.5 pieces-2019_02_27_Kmno4_plus.T-only4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only4.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only5 0.5 pieces-2019_02_27_Kmno4_plus.T-only5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only5.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only6 0.5 pieces-2019_02_27_Kmno4_plus.T-only6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only6.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only7 0.5 pieces-2019_02_27_Kmno4_plus.T-only7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only7.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only8 0.5 pieces-2019_02_27_Kmno4_plus.T-only8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only8.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_Kmno4_plus.T-only9 0.5 pieces-2019_02_27_Kmno4_plus.T-only9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_Kmno4_plus.T-only9.BI_w10_a10_b10.reads.tsv