python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_CLAPP.generic-A-C-T-G0 0.5 pieces-2019_02_27_CLAPP.generic-A-C-T-G0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_CLAPP.generic-A-C-T-G0.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_CLAPP.generic-A-C-T-G1 0.5 pieces-2019_02_27_CLAPP.generic-A-C-T-G1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_CLAPP.generic-A-C-T-G1.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_CLAPP.generic-A-C-T-G10 0.5 pieces-2019_02_27_CLAPP.generic-A-C-T-G10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_CLAPP.generic-A-C-T-G10.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_CLAPP.generic-A-C-T-G11 0.5 pieces-2019_02_27_CLAPP.generic-A-C-T-G11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_CLAPP.generic-A-C-T-G11.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_CLAPP.generic-A-C-T-G12 0.5 pieces-2019_02_27_CLAPP.generic-A-C-T-G12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_CLAPP.generic-A-C-T-G12.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_CLAPP.generic-A-C-T-G13 0.5 pieces-2019_02_27_CLAPP.generic-A-C-T-G13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_CLAPP.generic-A-C-T-G13.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_CLAPP.generic-A-C-T-G2 0.5 pieces-2019_02_27_CLAPP.generic-A-C-T-G2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_CLAPP.generic-A-C-T-G2.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_CLAPP.generic-A-C-T-G3 0.5 pieces-2019_02_27_CLAPP.generic-A-C-T-G3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_CLAPP.generic-A-C-T-G3.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_CLAPP.generic-A-C-T-G4 0.5 pieces-2019_02_27_CLAPP.generic-A-C-T-G4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_CLAPP.generic-A-C-T-G4.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_CLAPP.generic-A-C-T-G5 0.5 pieces-2019_02_27_CLAPP.generic-A-C-T-G5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_CLAPP.generic-A-C-T-G5.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_CLAPP.generic-A-C-T-G6 0.5 pieces-2019_02_27_CLAPP.generic-A-C-T-G6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_CLAPP.generic-A-C-T-G6.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_CLAPP.generic-A-C-T-G7 0.5 pieces-2019_02_27_CLAPP.generic-A-C-T-G7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_CLAPP.generic-A-C-T-G7.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_CLAPP.generic-A-C-T-G8 0.5 pieces-2019_02_27_CLAPP.generic-A-C-T-G8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_CLAPP.generic-A-C-T-G8.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_27_CLAPP.generic-A-C-T-G9 0.5 pieces-2019_02_27_CLAPP.generic-A-C-T-G9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_27_CLAPP.generic-A-C-T-G9.BI_w10_a10_b10.reads.tsv