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python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G1 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G1.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G10 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G10.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G100 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G100.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G100.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G101 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G101.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G101.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G102 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G102.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G102.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G103 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G103.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G103.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G104 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G104.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G104.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G105 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G105.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G105.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G106 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G106.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G106.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G107 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G107.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G107.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G108 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G108.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G108.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G109 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G109.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G109.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G11 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G11.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G110 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G110.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G110.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G111 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G111.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G111.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G112 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G112.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G112.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G113 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G113.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G113.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G114 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G114.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G114.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G115 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G115.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G115.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G116 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G116.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G116.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G117 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G117.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G117.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G118 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G118.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G118.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G119 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G119.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G119.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G12 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G12.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G120 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G120.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G120.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G121 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G121.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G121.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G122 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G122.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G122.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G123 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G123.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G123.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G124 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G124.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G124.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G125 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G125.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G125.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G126 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G126.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G126.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G127 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G127.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G127.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G128 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G128.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G128.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G129 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G129.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G129.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G13 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G13.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G130 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G130.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G130.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G131 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G131.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G131.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G132 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G132.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G132.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G133 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G133.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G133.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G134 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G134.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G134.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G135 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G135.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G135.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G136 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G136.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G136.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G137 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G137.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G137.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G138 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G138.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G138.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G139 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G139.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G139.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G14 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G14.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G140 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G140.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G140.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G141 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G141.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G141.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G142 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G142.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G142.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G143 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G143.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G143.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G144 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G144.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G144.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G145 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G145.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G145.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G146 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G146.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G146.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G147 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G147.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G147.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G148 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G148.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G148.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G149 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G149.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G149.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G15 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G15.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G150 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G150.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G150.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G151 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G151.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G151.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G152 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G152.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G152.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G153 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G153.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G153.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G154 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G154.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G154.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G155 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G155.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G155.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G156 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G156.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G156.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G157 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G157.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G157.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G158 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G158.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G158.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G159 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G159.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G159.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G16 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G16.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G160 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G160.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G160.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G161 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G161.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G161.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G162 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G162.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G162.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G163 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G163.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G163.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G164 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G164.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G164.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G165 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G165.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G165.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G166 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G166.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G166.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G167 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G167.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G167.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G168 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G168.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G168.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G169 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G169.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G169.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G17 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G17.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G170 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G170.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G170.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G171 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G171.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G171.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G172 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G172.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G172.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G173 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G173.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G173.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G174 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G174.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G174.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G175 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G175.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G175.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G176 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G176.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G176.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G177 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G177.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G177.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G178 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G178.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G178.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G179 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G179.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G179.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G18 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G18.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G180 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G180.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G180.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G181 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G181.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G181.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G182 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G182.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G182.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G183 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G183.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G183.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G184 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G184.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G184.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G185 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G185.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G185.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G186 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G186.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G186.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G187 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G187.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G187.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G188 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G188.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G188.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G189 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G189.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G189.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G19 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G19.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G190 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G190.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G190.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G191 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G191.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G191.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G192 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G192.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G192.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G193 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G193.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G193.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G194 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G194.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G194.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G195 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G195.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G195.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G196 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G196.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G196.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G197 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G197.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G197.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G198 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G198.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G198.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G199 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G199.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G199.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G2 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G2.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G20 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G20.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G200 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G200.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G200.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G201 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G201.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G201.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G202 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G202.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G202.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G203 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G203.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G203.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G204 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G204.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G204.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G205 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G205.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G205.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G206 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G206.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G206.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G207 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G207.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G207.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G208 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G208.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G208.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G209 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G209.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G209.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G21 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G21.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G210 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G210.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G210.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G211 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G211.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G211.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G212 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G212.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G212.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G213 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G213.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G213.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G214 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G214.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G214.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G215 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G215.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G215.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G216 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G216.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G216.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G217 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G217.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G217.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G218 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G218.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G218.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G219 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G219.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G219.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G22 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G22.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G220 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G220.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G220.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G221 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G221.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G221.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G222 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G222.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G222.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G223 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G223.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G223.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G224 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G224.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G224.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G225 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G225.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G225.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G226 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G226.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G226.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G227 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G227.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G227.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G228 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G228.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G228.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G229 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G229.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G229.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G23 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G23.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G230 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G230.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G230.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G231 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G231.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G231.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G232 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G232.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G232.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G233 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G233.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G233.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G234 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G234.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G234.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G235 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G235.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G235.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G236 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G236.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G236.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G237 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G237.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G237.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G238 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G238.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G238.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G239 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G239.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G239.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G24 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G24.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G240 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G240.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G240.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G241 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G241.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G241.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G242 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G242.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G242.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G243 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G243.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G243.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G244 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G244.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G244.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G245 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G245.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G245.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G246 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G246.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G246.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G247 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G247.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G247.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G248 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G248.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G248.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G249 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G249.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G249.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G25 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G25.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G250 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G250.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G250.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G251 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G251.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G251.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G252 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G252.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G252.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G253 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G253.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G253.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G254 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G254.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G254.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G255 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G255.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G255.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G256 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G256.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G256.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G257 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G257.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G257.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G258 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G258.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G258.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G259 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G259.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G259.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G26 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G26.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G260 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G260.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G260.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G261 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G261.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G261.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G262 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G262.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G262.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G263 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G263.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G263.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G264 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G264.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G264.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G265 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G265.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G265.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G266 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G266.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G266.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G267 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G267.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G267.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G268 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G268.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G268.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G269 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G269.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G269.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G27 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G27.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G270 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G270.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G270.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G271 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G271.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G271.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G272 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G272.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G272.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G273 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G273.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G273.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G274 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G274.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G274.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G275 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G275.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G275.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G276 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G276.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G276.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G277 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G277.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G277.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G278 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G278.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G278.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G279 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G279.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G279.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G28 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G28.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G280 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G280.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G280.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G281 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G281.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G281.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G282 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G282.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G282.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G283 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G283.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G283.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G284 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G284.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G284.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G285 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G285.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G285.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G286 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G286.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G286.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G287 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G287.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G287.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G288 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G288.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G288.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G289 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G289.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G289.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G29 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G29.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G290 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G290.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G290.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G291 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G291.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G291.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G292 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G292.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G292.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G293 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G293.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G293.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G294 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G294.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G294.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G295 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G295.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G295.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G296 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G296.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G296.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G297 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G297.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G297.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G298 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G298.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G298.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G299 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G299.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G299.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G3 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G3.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G30 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G30.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G300 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G300.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G300.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G301 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G301.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G301.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G302 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G302.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G302.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G303 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G303.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G303.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G304 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G304.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G304.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G305 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G305.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G305.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G306 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G306.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G306.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G307 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G307.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G307.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G308 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G308.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G308.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G309 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G309.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G309.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G31 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G31.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G310 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G310.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G310.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G311 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G311.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G311.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G312 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G312.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G312.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G313 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G313.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G313.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G314 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G314.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G314.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G315 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G315.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G315.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G316 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G316.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G316.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G317 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G317.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G317.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G318 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G318.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G318.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G319 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G319.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G319.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G32 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G32.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G320 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G320.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G320.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G321 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G321.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G321.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G322 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G322.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G322.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G323 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G323.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G323.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G324 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G324.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G324.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G325 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G325.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G325.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G326 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G326.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G326.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G327 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G327.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G327.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G328 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G328.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G328.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G329 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G329.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G329.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G33 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G33.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G330 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G330.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G330.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G331 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G331.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G331.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G332 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G332.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G332.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G333 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G333.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G333.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G334 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G334.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G334.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G335 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G335.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G335.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G336 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G336.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G336.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G337 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G337.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G337.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G338 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G338.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G338.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G339 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G339.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G339.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G34 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G34.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G340 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G340.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G340.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G341 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G341.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G341.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G342 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G342.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G342.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G343 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G343.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G343.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G344 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G344.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G344.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G345 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G345.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G345.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G346 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G346.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G346.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G347 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G347.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G347.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G348 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G348.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G348.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G349 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G349.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G349.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G35 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G35.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G350 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G350.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G350.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G351 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G351.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G351.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G352 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G352.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G352.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G353 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G353.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G353.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G354 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G354.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G354.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G355 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G355.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G355.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G356 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G356.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G356.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G357 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G357.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G357.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G358 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G358.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G358.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G359 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G359.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G359.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G36 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G36.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G360 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G360.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G360.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G361 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G361.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G361.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G362 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G362.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G362.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G363 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G363.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G363.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G364 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G364.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G364.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G365 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G365.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G365.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G366 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G366.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G366.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G367 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G367.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G367.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G368 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G368.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G368.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G369 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G369.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G369.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G37 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G37.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G370 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G370.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G370.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G371 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G371.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G371.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G372 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G372.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G372.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G373 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G373.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G373.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G374 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G374.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G374.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G375 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G375.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G375.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G376 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G376.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G376.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G377 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G377.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G377.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G378 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G378.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G378.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G379 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G379.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G379.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G38 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G38.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G380 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G380.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G380.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G381 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G381.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G381.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G382 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G382.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G382.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G383 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G383.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G383.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G384 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G384.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G384.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G385 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G385.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G385.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G386 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G386.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G386.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G387 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G387.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G387.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G388 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G388.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G388.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G389 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G389.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G389.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G39 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G39.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G390 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G390.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G390.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G391 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G391.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G391.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G392 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G392.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G392.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G393 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G393.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G393.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G394 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G394.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G394.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G395 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G395.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G395.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G396 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G396.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G396.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G397 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G397.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G397.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G398 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G398.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G398.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G399 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G399.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G399.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G4 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G4.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G40 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G40.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G400 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G400.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G400.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G401 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G401.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G401.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G402 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G402.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G402.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G403 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G403.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G403.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G404 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G404.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G404.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G405 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G405.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G405.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G406 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G406.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G406.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G407 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G407.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G407.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G408 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G408.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G408.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G409 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G409.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G409.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G41 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G41.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G410 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G410.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G410.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G411 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G411.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G411.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G412 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G412.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G412.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G413 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G413.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G413.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G414 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G414.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G414.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G415 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G415.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G415.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G416 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G416.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G416.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G417 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G417.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G417.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G418 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G418.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G418.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G419 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G419.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G419.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G42 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G42.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G420 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G420.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G420.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G421 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G421.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G421.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G422 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G422.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G422.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G423 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G423.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G423.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G424 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G424.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G424.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G425 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G425.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G425.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G426 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G426.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G426.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G427 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G427.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G427.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G428 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G428.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G428.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G429 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G429.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G429.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G43 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G43.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G430 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G430.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G430.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G431 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G431.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G431.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G432 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G432.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G432.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G433 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G433.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G433.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G434 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G434.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G434.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G435 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G435.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G435.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G436 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G436.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G436.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G437 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G437.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G437.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G438 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G438.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G438.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G439 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G439.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G439.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G44 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G44.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G440 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G440.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G440.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G441 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G441.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G441.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G442 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G442.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G442.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G443 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G443.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G443.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G444 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G444.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G444.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G445 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G445.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G445.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G446 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G446.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G446.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G447 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G447.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G447.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G448 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G448.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G448.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G449 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G449.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G449.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G45 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G45.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G450 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G450.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G450.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G451 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G451.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G451.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G452 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G452.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G452.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G453 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G453.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G453.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G454 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G454.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G454.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G455 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G455.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G455.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G456 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G456.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G456.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G457 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G457.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G457.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G458 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G458.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G458.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G459 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G459.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G459.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G46 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G46.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G460 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G460.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G460.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G461 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G461.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G461.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G462 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G462.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G462.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G463 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G463.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G463.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G464 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G464.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G464.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G465 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G465.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G465.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G466 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G466.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G466.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G467 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G467.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G467.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G468 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G468.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G468.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G469 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G469.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G469.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G47 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G47.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G470 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G470.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G470.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G471 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G471.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G471.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G472 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G472.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G472.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G473 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G473.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G473.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G474 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G474.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G474.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G475 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G475.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G475.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G476 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G476.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G476.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G477 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G477.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G477.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G478 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G478.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G478.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G479 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G479.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G479.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G48 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G48.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G480 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G480.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G480.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G481 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G481.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G481.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G482 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G482.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G482.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G483 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G483.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G483.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G484 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G484.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G484.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G485 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G485.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G485.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G486 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G486.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G486.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G487 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G487.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G487.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G488 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G488.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G488.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G489 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G489.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G489.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G49 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G49.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G490 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G490.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G490.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G491 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G491.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G491.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G492 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G492.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G492.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G493 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G493.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G493.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G494 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G494.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G494.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G495 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G495.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G495.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G496 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G496.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G496.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G497 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G497.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G497.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G498 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G498.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G498.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G499 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G499.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G499.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G5 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G5.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G50 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G50.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G500 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G500.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G500.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G501 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G501.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G501.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G502 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G502.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G502.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G503 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G503.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G503.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G504 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G504.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G504.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G505 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G505.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G505.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G506 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G506.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G506.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G507 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G507.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G507.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G508 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G508.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G508.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G509 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G509.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G509.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G51 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G51.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G510 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G510.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G510.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G511 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G511.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G511.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G512 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G512.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G512.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G513 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G513.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G513.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G514 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G514.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G514.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G515 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G515.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G515.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G516 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G516.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G516.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G517 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G517.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G517.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G518 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G518.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G518.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G519 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G519.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G519.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G52 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G52.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G520 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G520.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G520.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G521 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G521.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G521.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G522 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G522.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G522.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G523 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G523.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G523.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G524 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G524.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G524.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G525 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G525.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G525.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G526 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G526.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G526.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G527 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G527.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G527.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G528 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G528.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G528.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G529 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G529.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G529.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G53 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G53.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G530 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G530.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G530.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G531 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G531.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G531.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G532 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G532.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G532.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G533 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G533.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G533.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G534 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G534.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G534.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G535 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G535.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G535.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G536 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G536.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G536.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G537 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G537.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G537.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G538 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G538.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G538.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G539 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G539.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G539.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G54 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G54.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G540 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G540.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G540.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G541 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G541.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G541.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G542 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G542.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G542.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G543 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G543.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G543.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G544 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G544.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G544.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G545 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G545.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G545.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G546 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G546.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G546.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G547 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G547.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G547.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G548 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G548.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G548.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G549 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G549.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G549.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G55 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G55.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G550 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G550.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G550.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G551 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G551.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G551.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G552 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G552.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G552.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G553 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G553.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G553.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G554 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G554.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G554.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G555 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G555.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G555.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G556 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G556.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G556.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G557 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G557.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G557.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G558 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G558.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G558.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G559 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G559.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G559.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G56 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G56.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G560 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G560.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G560.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G561 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G561.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G561.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G562 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G562.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G562.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G563 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G563.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G563.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G564 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G564.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G564.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G565 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G565.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G565.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G566 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G566.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G566.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G567 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G567.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G567.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G568 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G568.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G568.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G569 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G569.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G569.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G57 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G57.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G570 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G570.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G570.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G571 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G571.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G571.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G572 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G572.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G572.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G573 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G573.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G573.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G574 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G574.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G574.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G575 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G575.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G575.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G576 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G576.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G576.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G577 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G577.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G577.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G578 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G578.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G578.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G579 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G579.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G579.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G58 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G58.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G580 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G580.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G580.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G581 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G581.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G581.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G582 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G582.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G582.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G583 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G583.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G583.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G584 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G584.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G584.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G585 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G585.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G585.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G586 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G586.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G586.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G587 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G587.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G587.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G588 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G588.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G588.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G589 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G589.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G589.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G59 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G59.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G590 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G590.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G590.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G591 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G591.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G591.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G592 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G592.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G592.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G593 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G593.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G593.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G594 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G594.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G594.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G595 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G595.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G595.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G596 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G596.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G596.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G597 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G597.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G597.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G598 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G598.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G598.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G599 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G599.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G599.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G6 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G6.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G60 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G60.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G600 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G600.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G600.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G601 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G601.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G601.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G602 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G602.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G602.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G603 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G603.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G603.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G604 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G604.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G604.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G605 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G605.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G605.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G606 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G606.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G606.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G607 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G607.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G607.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G608 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G608.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G608.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G609 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G609.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G609.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G61 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G61.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G610 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G610.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G610.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G611 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G611.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G611.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G612 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G612.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G612.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G613 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G613.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G613.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G614 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G614.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G614.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G615 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G615.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G615.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G616 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G616.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G616.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G617 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G617.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G617.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G618 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G618.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G618.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G619 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G619.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G619.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G62 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G62.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G620 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G620.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G620.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G621 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G621.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G621.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G622 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G622.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G622.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G623 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G623.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G623.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G624 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G624.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G624.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G625 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G625.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G625.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G626 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G626.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G626.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G627 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G627.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G627.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G628 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G628.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G628.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G629 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G629.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G629.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G63 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G63.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G630 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G630.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G630.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G631 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G631.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G631.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G632 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G632.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G632.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G633 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G633.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G633.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G634 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G634.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G634.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G635 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G635.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G635.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G636 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G636.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G636.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G637 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G637.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G637.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G638 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G638.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G638.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G639 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G639.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G639.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G64 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G64.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G64.BI_w10_a10_b10.reads.tsv
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python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G642 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G642.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G642.BI_w10_a10_b10.reads.tsv
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python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G645 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G645.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G645.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G646 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G646.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G646.BI_w10_a10_b10.reads.tsv
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python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G651 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G651.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G651.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G652 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G652.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G652.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G653 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G653.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G653.BI_w10_a10_b10.reads.tsv
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python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G655 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G655.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G655.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G656 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G656.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G656.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G657 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G657.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G657.BI_w10_a10_b10.reads.tsv
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python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G660 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G660.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G660.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G661 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G661.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G661.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G662 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G662.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G662.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G663 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G663.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G663.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G664 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G664.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G664.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G665 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G665.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G665.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G666 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G666.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G666.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G667 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G667.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G667.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G668 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G668.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G668.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G669 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G669.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G669.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G67 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G67.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G67.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G670 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G670.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G670.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G671 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G671.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G671.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G672 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G672.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G672.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G673 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G673.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G673.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G674 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G674.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G674.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G675 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G675.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G675.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G676 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G676.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G676.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G677 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G677.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G677.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G678 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G678.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G678.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G679 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G679.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G679.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G68 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G68.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G68.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G680 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G680.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G680.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G681 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G681.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G681.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G682 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G682.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G682.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G683 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G683.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G683.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G684 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G684.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G684.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G685 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G685.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G685.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G686 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G686.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G686.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G687 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G687.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G687.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G688 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G688.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G688.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G689 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G689.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G689.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G69 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G69.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G69.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G690 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G690.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G690.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G691 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G691.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G691.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G692 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G692.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G692.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G693 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G693.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G693.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G694 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G694.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G694.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G695 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G695.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G695.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G696 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G696.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G696.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G697 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G697.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G697.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G698 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G698.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G698.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G699 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G699.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G699.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G7 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G7.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G70 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G70.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G70.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G700 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G700.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G700.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G701 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G701.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G701.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G702 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G702.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G702.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G703 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G703.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G703.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G704 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G704.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G704.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G705 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G705.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G705.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G706 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G706.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G706.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G707 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G707.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G707.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G708 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G708.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G708.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G709 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G709.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G709.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G71 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G71.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G71.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G710 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G710.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G710.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G711 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G711.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G711.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G712 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G712.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G712.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G713 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G713.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G713.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G714 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G714.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G714.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G715 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G715.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G715.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G716 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G716.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G716.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G717 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G717.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G717.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G718 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G718.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G718.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G719 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G719.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G719.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G72 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G72.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G72.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G720 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G720.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G720.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G721 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G721.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G721.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G722 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G722.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G722.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G723 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G723.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G723.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G724 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G724.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G724.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G725 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G725.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G725.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G726 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G726.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G726.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G727 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G727.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G727.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G728 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G728.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G728.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G729 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G729.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G729.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G73 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G73.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G73.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G730 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G730.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G730.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G731 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G731.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G731.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G732 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G732.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G732.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G733 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G733.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G733.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G734 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G734.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G734.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G735 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G735.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G735.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G736 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G736.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G736.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G737 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G737.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G737.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G738 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G738.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G738.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G739 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G739.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G739.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G74 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G74.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G74.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G740 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G740.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G740.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G741 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G741.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G741.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G742 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G742.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G742.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G743 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G743.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G743.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G744 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G744.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G744.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G745 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G745.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G745.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G746 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G746.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G746.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G747 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G747.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G747.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G748 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G748.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G748.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G749 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G749.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G749.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G75 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G75.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G75.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G750 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G750.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G750.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G751 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G751.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G751.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G752 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G752.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G752.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G753 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G753.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G753.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G754 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G754.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G754.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G755 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G755.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G755.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G756 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G756.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G756.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G757 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G757.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G757.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G758 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G758.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G758.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G759 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G759.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G759.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G76 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G76.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G76.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G760 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G760.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G760.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G761 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G761.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G761.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G762 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G762.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G762.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G763 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G763.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G763.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G764 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G764.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G764.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G765 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G765.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G765.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G766 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G766.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G766.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G767 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G767.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G767.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G768 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G768.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G768.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G769 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G769.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G769.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G77 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G77.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G77.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G770 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G770.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G770.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G771 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G771.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G771.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G772 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G772.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G772.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G773 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G773.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G773.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G774 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G774.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G774.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G775 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G775.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G775.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G776 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G776.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G776.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G777 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G777.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G777.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G778 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G778.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G778.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G779 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G779.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G779.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G78 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G78.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G78.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G780 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G780.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G780.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G781 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G781.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G781.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G782 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G782.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G782.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G783 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G783.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G783.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G784 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G784.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G784.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G785 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G785.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G785.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G786 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G786.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G786.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G787 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G787.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G787.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G788 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G788.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G788.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G789 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G789.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G789.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G79 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G79.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G79.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G790 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G790.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G790.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G791 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G791.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G791.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G792 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G792.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G792.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G793 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G793.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G793.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G794 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G794.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G794.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G795 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G795.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G795.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G796 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G796.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G796.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G797 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G797.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G797.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G798 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G798.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G798.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G799 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G799.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G799.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G8 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G8.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G80 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G80.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G80.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G800 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G800.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G800.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G801 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G801.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G801.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G802 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G802.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G802.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G803 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G803.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G803.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G804 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G804.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G804.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G805 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G805.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G805.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G806 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G806.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G806.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G807 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G807.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G807.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G808 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G808.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G808.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G809 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G809.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G809.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G81 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G81.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G81.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G810 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G810.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G810.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G811 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G811.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G811.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G812 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G812.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G812.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G813 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G813.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G813.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G814 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G814.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G814.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G815 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G815.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G815.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G816 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G816.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G816.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G817 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G817.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G817.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G818 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G818.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G818.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G819 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G819.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G819.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G82 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G82.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G82.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G820 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G820.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G820.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G821 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G821.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G821.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G822 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G822.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G822.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G823 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G823.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G823.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G824 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G824.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G824.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G825 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G825.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G825.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G826 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G826.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G826.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G827 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G827.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G827.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G828 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G828.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G828.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G829 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G829.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G829.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G83 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G83.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G83.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G830 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G830.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G830.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G831 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G831.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G831.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G832 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G832.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G832.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G833 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G833.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G833.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G834 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G834.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G834.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G835 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G835.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G835.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G836 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G836.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G836.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G837 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G837.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G837.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G838 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G838.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G838.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G839 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G839.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G839.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G84 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G84.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G84.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G840 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G840.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G840.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G841 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G841.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G841.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G842 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G842.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G842.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G85 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G85.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G85.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G86 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G86.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G86.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G87 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G87.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G87.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G88 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G88.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G88.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G89 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G89.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G89.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G9 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G9.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G90 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G90.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G90.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G91 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G91.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G91.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G92 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G92.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G92.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G93 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G93.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G93.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G94 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G94.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G94.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G95 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G95.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G95.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G96 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G96.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G96.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G97 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G97.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G97.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G98 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G98.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G98.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G99 0.5 pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G99.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_02_13_Haloferax_CLAPP.generic-A-C-T-G99.BI_w10_a10_b10.reads.tsv