python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all0 0.5 pieces-2019_01_29_Lambda_Butyl.all0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all0.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all1 0.5 pieces-2019_01_29_Lambda_Butyl.all1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all1.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all10 0.5 pieces-2019_01_29_Lambda_Butyl.all10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all10.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all11 0.5 pieces-2019_01_29_Lambda_Butyl.all11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all11.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all12 0.5 pieces-2019_01_29_Lambda_Butyl.all12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all12.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all13 0.5 pieces-2019_01_29_Lambda_Butyl.all13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all13.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all14 0.5 pieces-2019_01_29_Lambda_Butyl.all14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all14.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all15 0.5 pieces-2019_01_29_Lambda_Butyl.all15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all15.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all16 0.5 pieces-2019_01_29_Lambda_Butyl.all16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all16.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all17 0.5 pieces-2019_01_29_Lambda_Butyl.all17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all17.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all18 0.5 pieces-2019_01_29_Lambda_Butyl.all18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all18.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all19 0.5 pieces-2019_01_29_Lambda_Butyl.all19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all19.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all2 0.5 pieces-2019_01_29_Lambda_Butyl.all2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all2.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all20 0.5 pieces-2019_01_29_Lambda_Butyl.all20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all20.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all21 0.5 pieces-2019_01_29_Lambda_Butyl.all21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all21.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all22 0.5 pieces-2019_01_29_Lambda_Butyl.all22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all22.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all23 0.5 pieces-2019_01_29_Lambda_Butyl.all23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all23.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all24 0.5 pieces-2019_01_29_Lambda_Butyl.all24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all24.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all25 0.5 pieces-2019_01_29_Lambda_Butyl.all25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all25.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all26 0.5 pieces-2019_01_29_Lambda_Butyl.all26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all26.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all27 0.5 pieces-2019_01_29_Lambda_Butyl.all27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all27.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all28 0.5 pieces-2019_01_29_Lambda_Butyl.all28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all28.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all29 0.5 pieces-2019_01_29_Lambda_Butyl.all29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all29.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all3 0.5 pieces-2019_01_29_Lambda_Butyl.all3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all3.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all30 0.5 pieces-2019_01_29_Lambda_Butyl.all30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all30.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all31 0.5 pieces-2019_01_29_Lambda_Butyl.all31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all31.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all32 0.5 pieces-2019_01_29_Lambda_Butyl.all32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all32.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all33 0.5 pieces-2019_01_29_Lambda_Butyl.all33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all33.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all34 0.5 pieces-2019_01_29_Lambda_Butyl.all34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all34.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all35 0.5 pieces-2019_01_29_Lambda_Butyl.all35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all35.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all36 0.5 pieces-2019_01_29_Lambda_Butyl.all36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all36.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all37 0.5 pieces-2019_01_29_Lambda_Butyl.all37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all37.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all38 0.5 pieces-2019_01_29_Lambda_Butyl.all38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all38.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all39 0.5 pieces-2019_01_29_Lambda_Butyl.all39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all39.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all4 0.5 pieces-2019_01_29_Lambda_Butyl.all4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all4.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all40 0.5 pieces-2019_01_29_Lambda_Butyl.all40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all40.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all41 0.5 pieces-2019_01_29_Lambda_Butyl.all41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all41.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all42 0.5 pieces-2019_01_29_Lambda_Butyl.all42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all42.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all43 0.5 pieces-2019_01_29_Lambda_Butyl.all43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all43.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all44 0.5 pieces-2019_01_29_Lambda_Butyl.all44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all44.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all45 0.5 pieces-2019_01_29_Lambda_Butyl.all45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all45.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all46 0.5 pieces-2019_01_29_Lambda_Butyl.all46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all46.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all47 0.5 pieces-2019_01_29_Lambda_Butyl.all47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all47.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all48 0.5 pieces-2019_01_29_Lambda_Butyl.all48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all48.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all49 0.5 pieces-2019_01_29_Lambda_Butyl.all49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all49.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all5 0.5 pieces-2019_01_29_Lambda_Butyl.all5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all5.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all50 0.5 pieces-2019_01_29_Lambda_Butyl.all50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all50.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all51 0.5 pieces-2019_01_29_Lambda_Butyl.all51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all51.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all52 0.5 pieces-2019_01_29_Lambda_Butyl.all52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all52.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all6 0.5 pieces-2019_01_29_Lambda_Butyl.all6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all6.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all7 0.5 pieces-2019_01_29_Lambda_Butyl.all7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all7.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all8 0.5 pieces-2019_01_29_Lambda_Butyl.all8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all8.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.all9 0.5 pieces-2019_01_29_Lambda_Butyl.all9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.all9.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only0 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only0.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only1 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only1.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only10 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only10.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only11 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only11.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only12 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only12.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only13 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only13.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only14 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only14.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only15 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only15.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only16 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only16.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only17 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only17.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only18 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only18.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only19 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only19.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only2 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only2.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only20 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only20.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only21 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only21.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only22 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only22.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only23 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only23.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only24 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only24.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only25 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only25.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only26 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only26.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only27 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only27.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only28 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only28.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only29 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only29.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only3 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only3.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only30 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only30.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only31 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only31.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only32 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only32.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only33 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only33.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only34 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only34.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only35 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only35.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only36 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only36.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only37 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only37.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only38 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only38.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only39 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only39.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only4 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only4.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only40 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only40.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only41 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only41.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only42 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only42.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only43 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only43.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only44 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only44.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only45 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only45.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only46 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only46.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only47 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only47.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only48 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only48.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only49 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only49.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only5 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only5.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only50 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only50.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only51 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only51.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only52 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only52.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only6 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only6.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only7 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only7.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only8 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only8.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.CG-only9 0.5 pieces-2019_01_29_Lambda_Butyl.CG-only9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.CG-only9.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only0 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only0.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only1 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only1.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only10 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only10.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only11 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only11.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only12 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only12.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only13 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only13.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only14 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only14.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only15 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only15.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only16 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only16.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only17 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only17.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only18 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only18.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only19 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only19.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only2 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only2.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only20 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only20.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only21 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only21.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only22 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only22.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only23 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only23.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only24 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only24.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only25 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only25.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only26 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only26.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only27 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only27.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only28 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only28.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only29 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only29.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only3 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only3.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only30 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only30.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only31 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only31.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only32 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only32.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only33 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only33.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only34 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only34.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only35 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only35.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only36 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only36.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only37 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only37.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only38 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only38.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only39 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only39.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only4 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only4.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only40 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only40.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only41 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only41.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only42 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only42.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only43 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only43.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only44 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only44.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only45 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only45.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only46 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only46.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only47 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only47.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only48 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only48.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only49 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only49.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only5 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only5.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only50 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only50.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only51 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only51.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only52 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only52.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only6 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only6.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only7 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only7.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only8 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only8.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.GC-only9 0.5 pieces-2019_01_29_Lambda_Butyl.GC-only9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.GC-only9.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only0 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only0.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only1 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only1.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only10 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only10.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only11 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only11.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only12 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only12.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only13 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only13.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only14 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only14.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only15 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only15.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only16 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only16.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only17 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only17.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only18 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only18.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only19 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only19.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only2 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only2.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only20 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only20.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only21 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only21.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only22 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only22.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only23 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only23.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only24 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only24.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only25 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only25.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only26 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only26.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only27 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only27.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only28 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only28.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only29 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only29.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only3 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only3.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only30 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only30.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only31 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only31.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only32 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only32.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only33 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only33.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only34 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only34.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only35 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only35.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only36 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only36.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only37 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only37.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only38 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only38.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only39 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only39.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only4 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only4.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only40 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only40.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only41 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only41.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only42 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only42.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only43 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only43.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only44 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only44.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only45 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only45.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only46 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only46.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only47 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only47.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only48 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only48.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only49 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only49.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only5 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only5.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only50 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only50.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only51 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only51.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only52 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only52.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only6 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only6.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only7 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only7.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only8 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only8.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.m6A-only9 0.5 pieces-2019_01_29_Lambda_Butyl.m6A-only9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.m6A-only9.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only0 0.5 pieces-2019_01_29_Lambda_Butyl.T-only0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only0.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only1 0.5 pieces-2019_01_29_Lambda_Butyl.T-only1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only1.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only10 0.5 pieces-2019_01_29_Lambda_Butyl.T-only10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only10.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only11 0.5 pieces-2019_01_29_Lambda_Butyl.T-only11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only11.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only12 0.5 pieces-2019_01_29_Lambda_Butyl.T-only12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only12.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only13 0.5 pieces-2019_01_29_Lambda_Butyl.T-only13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only13.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only14 0.5 pieces-2019_01_29_Lambda_Butyl.T-only14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only14.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only15 0.5 pieces-2019_01_29_Lambda_Butyl.T-only15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only15.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only16 0.5 pieces-2019_01_29_Lambda_Butyl.T-only16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only16.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only17 0.5 pieces-2019_01_29_Lambda_Butyl.T-only17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only17.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only18 0.5 pieces-2019_01_29_Lambda_Butyl.T-only18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only18.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only19 0.5 pieces-2019_01_29_Lambda_Butyl.T-only19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only19.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only2 0.5 pieces-2019_01_29_Lambda_Butyl.T-only2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only2.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only20 0.5 pieces-2019_01_29_Lambda_Butyl.T-only20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only20.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only21 0.5 pieces-2019_01_29_Lambda_Butyl.T-only21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only21.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only22 0.5 pieces-2019_01_29_Lambda_Butyl.T-only22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only22.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only23 0.5 pieces-2019_01_29_Lambda_Butyl.T-only23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only23.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only24 0.5 pieces-2019_01_29_Lambda_Butyl.T-only24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only24.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only25 0.5 pieces-2019_01_29_Lambda_Butyl.T-only25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only25.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only26 0.5 pieces-2019_01_29_Lambda_Butyl.T-only26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only26.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only27 0.5 pieces-2019_01_29_Lambda_Butyl.T-only27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only27.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only28 0.5 pieces-2019_01_29_Lambda_Butyl.T-only28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only28.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only29 0.5 pieces-2019_01_29_Lambda_Butyl.T-only29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only29.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only3 0.5 pieces-2019_01_29_Lambda_Butyl.T-only3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only3.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only30 0.5 pieces-2019_01_29_Lambda_Butyl.T-only30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only30.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only31 0.5 pieces-2019_01_29_Lambda_Butyl.T-only31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only31.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only32 0.5 pieces-2019_01_29_Lambda_Butyl.T-only32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only32.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only33 0.5 pieces-2019_01_29_Lambda_Butyl.T-only33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only33.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only34 0.5 pieces-2019_01_29_Lambda_Butyl.T-only34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only34.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only35 0.5 pieces-2019_01_29_Lambda_Butyl.T-only35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only35.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only36 0.5 pieces-2019_01_29_Lambda_Butyl.T-only36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only36.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only37 0.5 pieces-2019_01_29_Lambda_Butyl.T-only37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only37.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only38 0.5 pieces-2019_01_29_Lambda_Butyl.T-only38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only38.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only39 0.5 pieces-2019_01_29_Lambda_Butyl.T-only39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only39.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only4 0.5 pieces-2019_01_29_Lambda_Butyl.T-only4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only4.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only40 0.5 pieces-2019_01_29_Lambda_Butyl.T-only40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only40.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only41 0.5 pieces-2019_01_29_Lambda_Butyl.T-only41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only41.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only42 0.5 pieces-2019_01_29_Lambda_Butyl.T-only42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only42.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only43 0.5 pieces-2019_01_29_Lambda_Butyl.T-only43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only43.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only44 0.5 pieces-2019_01_29_Lambda_Butyl.T-only44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only44.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only45 0.5 pieces-2019_01_29_Lambda_Butyl.T-only45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only45.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only46 0.5 pieces-2019_01_29_Lambda_Butyl.T-only46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only46.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only47 0.5 pieces-2019_01_29_Lambda_Butyl.T-only47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only47.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only48 0.5 pieces-2019_01_29_Lambda_Butyl.T-only48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only48.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only49 0.5 pieces-2019_01_29_Lambda_Butyl.T-only49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only49.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only5 0.5 pieces-2019_01_29_Lambda_Butyl.T-only5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only5.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only50 0.5 pieces-2019_01_29_Lambda_Butyl.T-only50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only50.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only51 0.5 pieces-2019_01_29_Lambda_Butyl.T-only51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only51.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only52 0.5 pieces-2019_01_29_Lambda_Butyl.T-only52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only52.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only6 0.5 pieces-2019_01_29_Lambda_Butyl.T-only6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only6.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only7 0.5 pieces-2019_01_29_Lambda_Butyl.T-only7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only7.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only8 0.5 pieces-2019_01_29_Lambda_Butyl.T-only8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only8.BI_w10_a10_b10.reads.tsv &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_01_29_Lambda_Butyl.T-only9 0.5 pieces-2019_01_29_Lambda_Butyl.T-only9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_01_29_Lambda_Butyl.T-only9.BI_w10_a10_b10.reads.tsv &