python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all0 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all0.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all1 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all1.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all10 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all10.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all11 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all11.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all12 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all12.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all13 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all13.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all14 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all14.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all15 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all15.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all16 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all16.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all17 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all17.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all18 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all18.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all19 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all19.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all2 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all2.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all20 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all20.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all21 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all21.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all22 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all22.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all23 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all23.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all24 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all24.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all25 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all25.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all26 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all26.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all27 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all27.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all28 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all28.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all29 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all29.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all3 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all3.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all30 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all30.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all31 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all31.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all32 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all32.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all33 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all33.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all34 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all34.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all35 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all35.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all36 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all36.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all37 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all37.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all38 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all38.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all39 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all39.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all4 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all4.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all40 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all40.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all41 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all41.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all42 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all42.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all43 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all43.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all44 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all44.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all45 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all45.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all46 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all46.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all47 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all47.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all48 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all48.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all49 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all49.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all5 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all5.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all50 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all50.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all51 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all51.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all52 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all52.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all53 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all53.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all54 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all54.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all55 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all55.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all56 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all56.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all57 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all57.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all58 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all58.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all59 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all59.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all6 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all6.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all60 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all60.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all61 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all61.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all62 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all62.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all63 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all63.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all7 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all7.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all8 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all8.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all9 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.all9.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only0 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only0.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only1 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only1.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only10 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only10.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only11 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only11.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only12 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only12.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only13 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only13.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only14 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only14.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only15 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only15.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only16 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only16.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only17 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only17.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only18 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only18.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only19 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only19.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only2 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only2.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only20 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only20.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only21 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only21.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only22 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only22.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only23 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only23.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only24 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only24.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only25 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only25.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only26 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only26.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only27 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only27.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only28 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only28.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only29 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only29.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only3 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only3.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only30 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only30.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only31 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only31.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only32 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only32.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only33 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only33.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only34 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only34.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only35 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only35.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only36 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only36.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only37 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only37.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only38 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only38.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only39 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only39.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only4 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only4.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only40 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only40.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only41 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only41.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only42 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only42.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only43 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only43.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only44 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only44.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only45 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only45.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only46 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only46.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only47 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only47.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only48 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only48.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only49 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only49.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only5 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only5.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only50 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only50.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only51 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only51.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only52 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only52.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only53 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only53.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only54 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only54.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only55 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only55.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only56 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only56.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only57 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only57.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only58 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only58.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only59 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only59.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only6 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only6.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only60 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only60.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only61 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only61.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only62 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only62.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only63 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only63.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only7 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only7.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only8 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only8.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only9 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.CG-only9.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only0 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only0.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only1 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only1.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only10 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only10.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only11 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only11.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only12 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only12.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only13 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only13.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only14 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only14.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only15 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only15.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only16 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only16.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only17 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only17.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only18 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only18.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only19 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only19.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only2 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only2.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only20 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only20.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only21 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only21.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only22 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only22.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only23 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only23.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only24 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only24.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only25 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only25.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only26 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only26.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only27 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only27.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only28 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only28.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only29 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only29.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only3 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only3.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only30 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only30.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only31 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only31.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only32 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only32.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only33 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only33.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only34 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only34.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only35 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only35.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only36 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only36.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only37 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only37.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only38 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only38.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only39 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only39.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only4 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only4.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only40 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only40.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only41 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only41.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only42 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only42.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only43 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only43.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only44 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only44.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only45 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only45.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only46 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only46.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only47 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only47.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only48 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only48.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only49 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only49.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only5 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only5.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only50 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only50.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only51 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only51.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only52 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only52.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only53 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only53.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only54 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only54.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only55 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only55.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only56 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only56.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only57 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only57.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only58 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only58.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only59 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only59.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only6 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only6.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only60 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only60.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only61 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only61.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only62 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only62.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only63 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only63.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only7 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only7.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only8 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only8.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only9 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.GC-only9.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only0 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only0.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only1 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only1.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only10 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only10.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only11 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only11.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only12 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only12.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only13 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only13.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only14 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only14.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only15 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only15.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only16 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only16.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only17 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only17.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only18 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only18.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only19 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only19.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only2 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only2.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only20 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only20.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only21 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only21.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only22 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only22.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only23 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only23.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only24 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only24.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only25 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only25.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only26 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only26.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only27 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only27.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only28 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only28.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only29 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only29.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only3 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only3.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only30 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only30.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only31 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only31.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only32 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only32.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only33 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only33.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only34 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only34.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only35 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only35.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only36 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only36.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only37 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only37.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only38 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only38.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only39 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only39.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only4 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only4.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only40 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only40.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only41 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only41.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only42 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only42.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only43 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only43.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only44 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only44.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only45 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only45.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only46 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only46.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only47 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only47.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only48 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only48.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only49 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only49.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only5 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only5.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only50 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only50.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only51 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only51.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only52 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only52.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only53 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only53.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only54 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only54.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only55 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only55.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only56 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only56.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only57 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only57.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only58 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only58.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only59 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only59.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only6 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only6.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only60 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only60.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only61 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only61.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only62 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only62.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only63 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only63.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only7 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only7.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only8 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only8.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only9 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-GC-CG-only9.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only0 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only0.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only1 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only1.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only10 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only10.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only11 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only11.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only12 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only12.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only13 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only13.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only14 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only14.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only15 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only15.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only16 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only16.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only17 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only17.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only18 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only18.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only19 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only19.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only2 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only2.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only20 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only20.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only21 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only21.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only22 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only22.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only23 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only23.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only24 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only24.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only25 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only25.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only26 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only26.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only27 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only27.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only28 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only28.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only29 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only29.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only3 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only3.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only30 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only30.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only31 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only31.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only32 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only32.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only33 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only33.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only34 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only34.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only35 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only35.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only36 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only36.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only37 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only37.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only38 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only38.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only39 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only39.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only4 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only4.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only40 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only40.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only41 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only41.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only42 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only42.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only43 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only43.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only44 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only44.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only45 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only45.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only46 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only46.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only47 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only47.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only48 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only48.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only49 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only49.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only5 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only5.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only50 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only50.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only51 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only51.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only52 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only52.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only53 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only53.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only54 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only54.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only55 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only55.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only56 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only56.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only57 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only57.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only58 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only58.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only59 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only59.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only6 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only6.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only60 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only60.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only61 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only61.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only62 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only62.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only63 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only63.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only7 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only7.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only8 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only8.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only9 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.m6A-only9.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only0 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only0.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only1 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only1.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only10 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only10.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only11 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only11.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only12 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only12.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only13 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only13.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only14 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only14.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only15 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only15.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only16 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only16.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only17 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only17.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only18 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only18.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only19 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only19.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only2 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only2.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only20 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only20.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only21 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only21.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only22 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only22.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only23 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only23.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only24 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only24.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only25 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only25.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only26 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only26.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only27 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only27.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only28 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only28.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only29 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only29.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only3 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only3.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only30 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only30.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only31 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only31.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only32 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only32.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only33 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only33.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only34 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only34.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only35 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only35.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only36 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only36.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only37 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only37.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only38 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only38.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only39 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only39.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only4 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only4.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only40 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only40.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only41 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only41.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only42 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only42.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only43 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only43.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only44 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only44.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only45 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only45.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only46 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only46.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only47 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only47.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only48 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only48.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only49 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only49.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only5 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only5.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only50 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only50.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only51 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only51.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only52 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only52.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only53 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only53.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only54 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only54.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only55 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only55.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only56 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only56.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only57 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only57.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only58 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only58.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only59 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only59.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only6 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only6.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only60 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only60.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only61 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only61.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only62 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only62.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only63 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only63.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only7 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only7.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only8 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only8.BI_w10_a10_b10.reads.tsv
python ~/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only9 0.5 pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2018_12_13_0h_Diamide_Lithu_TaqI_Hey-Lambda.T-only9.BI_w10_a10_b10.reads.tsv