Rscript ~/code/spp/spp_package/run_spp.R -c=L5811-HEK_SPI1_1_SPI_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5811-HEK_SPI1_1_SPI_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5812-HEK_SPI1_0.5_SPI_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5812-HEK_SPI1_0.5_SPI_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5813-HEK_SPI1_0.25_SPI_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5813-HEK_SPI1_0.25_SPI_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5814-HEK_SPI1_0.05_SPI_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5814-HEK_SPI1_0.05_SPI_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5815-HEK_SOX2_1_SOX_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5815-HEK_SOX2_1_SOX_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5816-HEK_SOX2_0.75_SOX_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5816-HEK_SOX2_0.75_SOX_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5817-HEK_SOX2_0.5_SOX_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5817-HEK_SOX2_0.5_SOX_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5818-HEK_SOX2_0.25_SOX_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5818-HEK_SOX2_0.25_SOX_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5819-HEK_SOX2_0.05_SOX_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5819-HEK_SOX2_0.05_SOX_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5820-HEK_IRF4_1_IRF4_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5820-HEK_IRF4_1_IRF4_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5821-HEK_IRF4_0.5_IRF4_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5821-HEK_IRF4_0.5_IRF4_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5822-HEK_IRF4_0.25_IRF4_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5822-HEK_IRF4_0.25_IRF4_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5823-HEK_IRF4_0.05_IRF4_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5823-HEK_IRF4_0.05_IRF4_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5824-HEK_LEF1_1_LEF1_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5824-HEK_LEF1_1_LEF1_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5825-HEK_LEF1_0.5_LEF1_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5825-HEK_LEF1_0.5_LEF1_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5826-HEK_LEF1_0.25_LEF1_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5826-HEK_LEF1_0.25_LEF1_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5827-HEK_LEF1_0.05_LEF1_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5827-HEK_LEF1_0.05_LEF1_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5828-HEK_ALX4_1_ALX4-FLAG_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5828-HEK_ALX4_1_ALX4-FLAG_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5829-HEK_ALX4_0.5_ALX4-FLAG_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5829-HEK_ALX4_0.5_ALX4-FLAG_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5830-HEK_ALX4_0.25_ALX4-FLAG_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5830-HEK_ALX4_0.25_ALX4-FLAG_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5831-HEK_ALX4_0.05_ALX4-FLAG_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5831-HEK_ALX4_0.05_ALX4-FLAG_Input.1x36mers.QC