Index of /kundaje/marinovg/oak/various/ENCODE4/ChIP/2026-03-31-NextSeq-run

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]MACS2026-04-01 22:13 1.5K 
[ ]MACS-region-stats2026-04-01 22:26 1.9K 
[TXT]MarkDuplicates.sh2026-04-01 16:24 7.8K 
[TXT]PEInsertDistFromBAM-2x36mers.sh2026-04-01 16:24 5.8K 
[ ]SAMstats-1x36mers.files2026-04-01 16:24 2.1K 
[TXT]SAMstats-1x36mers.sh2026-04-01 16:24 6.6K 
[ ]SAMstats-1x36mers.table2026-04-01 21:36 1.7K 
[ ]SAMstats-2x36mers.dedup.table2026-04-01 21:52 1.7K 
[ ]SAMstats-2x36mers.files2026-04-01 16:24 4.4K 
[TXT]SAMstats-2x36mers.sh2026-04-01 16:24 13K 
[ ]SAMstats-2x36mers.table2026-04-01 21:52 3.4K 
[ ]SAMstats-2x36mers.unique.table2026-04-01 21:52 1.7K 
[ ]SAMstats-L5770-HEK_SPI1_1_SPI_ChIP.1x36mers.unique2026-04-01 20:15 154  
[ ]SAMstats-L5770-HEK_SPI1_1_SPI_ChIP.2x36mers.unique2026-04-01 20:24 155  
[ ]SAMstats-L5770-HEK_SPI1_1_SPI_ChIP.2x36mers.unique.dedup2026-04-01 20:22 155  
[ ]SAMstats-L5771-HEK_SPI1_0.5_SPI_ChIP.1x36mers.unique2026-04-01 20:20 154  
[ ]SAMstats-L5771-HEK_SPI1_0.5_SPI_ChIP.2x36mers.unique2026-04-01 20:17 155  
[ ]SAMstats-L5771-HEK_SPI1_0.5_SPI_ChIP.2x36mers.unique.dedup2026-04-01 20:14 155  
[ ]SAMstats-L5772-HEK_SPI1_0.25_SPI_ChIP.1x36mers.unique2026-04-01 20:23 155  
[ ]SAMstats-L5772-HEK_SPI1_0.25_SPI_ChIP.2x36mers.unique2026-04-01 20:16 155  
[ ]SAMstats-L5772-HEK_SPI1_0.25_SPI_ChIP.2x36mers.unique.dedup2026-04-01 20:15 155  
[ ]SAMstats-L5773-HEK_SPI1_0.05_SPI_ChIP.1x36mers.unique2026-04-01 20:33 154  
[ ]SAMstats-L5773-HEK_SPI1_0.05_SPI_ChIP.2x36mers.unique2026-04-01 20:17 155  
[ ]SAMstats-L5773-HEK_SPI1_0.05_SPI_ChIP.2x36mers.unique.dedup2026-04-01 20:15 155  
[ ]SAMstats-L5774-HEK_SOX2_1_SOX_ChIP.1x36mers.unique2026-04-01 20:35 155  
[ ]SAMstats-L5774-HEK_SOX2_1_SOX_ChIP.2x36mers.unique2026-04-01 20:24 155  
[ ]SAMstats-L5774-HEK_SOX2_1_SOX_ChIP.2x36mers.unique.dedup2026-04-01 20:30 155  
[ ]SAMstats-L5775-HEK_SOX2_0.75_SOX_ChIP.1x36mers.unique2026-04-01 20:23 155  
[ ]SAMstats-L5775-HEK_SOX2_0.75_SOX_ChIP.2x36mers.unique2026-04-01 20:46 155  
[ ]SAMstats-L5775-HEK_SOX2_0.75_SOX_ChIP.2x36mers.unique.dedup2026-04-01 20:24 155  
[ ]SAMstats-L5776-HEK_SOX2_0.5_SOX_ChIP.1x36mers.unique2026-04-01 20:15 155  
[ ]SAMstats-L5776-HEK_SOX2_0.5_SOX_ChIP.2x36mers.unique2026-04-01 20:28 155  
[ ]SAMstats-L5776-HEK_SOX2_0.5_SOX_ChIP.2x36mers.unique.dedup2026-04-01 20:39 155  
[ ]SAMstats-L5777-HEK_SOX2_0.25_SOX_ChIP.1x36mers.unique2026-04-01 20:27 155  
[ ]SAMstats-L5777-HEK_SOX2_0.25_SOX_ChIP.2x36mers.unique2026-04-01 20:45 155  
[ ]SAMstats-L5777-HEK_SOX2_0.25_SOX_ChIP.2x36mers.unique.dedup2026-04-01 20:50 155  
[ ]SAMstats-L5778-HEK_SOX2_0.05_SOX_ChIP.1x36mers.unique2026-04-01 20:41 155  
[ ]SAMstats-L5778-HEK_SOX2_0.05_SOX_ChIP.2x36mers.unique2026-04-01 20:49 155  
[ ]SAMstats-L5778-HEK_SOX2_0.05_SOX_ChIP.2x36mers.unique.dedup2026-04-01 20:46 155  
[ ]SAMstats-L5779-HEK_IRF4_1_IRF4_ChIP.1x36mers.unique2026-04-01 20:16 155  
[ ]SAMstats-L5779-HEK_IRF4_1_IRF4_ChIP.2x36mers.unique2026-04-01 20:48 155  
[ ]SAMstats-L5779-HEK_IRF4_1_IRF4_ChIP.2x36mers.unique.dedup2026-04-01 20:33 155  
[ ]SAMstats-L5780-HEK_IRF4_0.5_IRF4_ChIP.1x36mers.unique2026-04-01 20:11 155  
[ ]SAMstats-L5780-HEK_IRF4_0.5_IRF4_ChIP.2x36mers.unique2026-04-01 20:31 155  
[ ]SAMstats-L5780-HEK_IRF4_0.5_IRF4_ChIP.2x36mers.unique.dedup2026-04-01 20:46 155  
[ ]SAMstats-L5781-HEK_IRF4_0.25_IRF4_ChIP.1x36mers.unique2026-04-01 20:23 155  
[ ]SAMstats-L5781-HEK_IRF4_0.25_IRF4_ChIP.2x36mers.unique2026-04-01 20:45 155  
[ ]SAMstats-L5781-HEK_IRF4_0.25_IRF4_ChIP.2x36mers.unique.dedup2026-04-01 20:25 155  
[ ]SAMstats-L5782-HEK_IRF4_0.05_IRF4_ChIP.1x36mers.unique2026-04-01 20:29 155  
[ ]SAMstats-L5782-HEK_IRF4_0.05_IRF4_ChIP.2x36mers.unique2026-04-01 20:13 155  
[ ]SAMstats-L5782-HEK_IRF4_0.05_IRF4_ChIP.2x36mers.unique.dedup2026-04-01 20:33 155  
[ ]SAMstats-L5783-HEK_LEF1_1_LEF1_ChIP.1x36mers.unique2026-04-01 20:17 155  
[ ]SAMstats-L5783-HEK_LEF1_1_LEF1_ChIP.2x36mers.unique2026-04-01 20:30 155  
[ ]SAMstats-L5783-HEK_LEF1_1_LEF1_ChIP.2x36mers.unique.dedup2026-04-01 20:29 155  
[ ]SAMstats-L5784-HEK_LEF1_0.5_LEF1_ChIP.1x36mers.unique2026-04-01 20:34 155  
[ ]SAMstats-L5784-HEK_LEF1_0.5_LEF1_ChIP.2x36mers.unique2026-04-01 20:35 155  
[ ]SAMstats-L5784-HEK_LEF1_0.5_LEF1_ChIP.2x36mers.unique.dedup2026-04-01 20:51 155  
[ ]SAMstats-L5785-HEK_LEF1_0.25_LEF1_ChIP.1x36mers.unique2026-04-01 20:35 155  
[ ]SAMstats-L5785-HEK_LEF1_0.25_LEF1_ChIP.2x36mers.unique2026-04-01 21:08 155  
[ ]SAMstats-L5785-HEK_LEF1_0.25_LEF1_ChIP.2x36mers.unique.dedup2026-04-01 21:09 155  
[ ]SAMstats-L5786-HEK_LEF1_0.05_LEF1_ChIP.1x36mers.unique2026-04-01 20:38 155  
[ ]SAMstats-L5786-HEK_LEF1_0.05_LEF1_ChIP.2x36mers.unique2026-04-01 21:24 155  
[ ]SAMstats-L5786-HEK_LEF1_0.05_LEF1_ChIP.2x36mers.unique.dedup2026-04-01 21:20 155  
[ ]SAMstats-L5787-HEK_ALX4_1_ALX4-FLAG_ChIP.1x36mers.unique2026-04-01 20:12 155  
[ ]SAMstats-L5787-HEK_ALX4_1_ALX4-FLAG_ChIP.2x36mers.unique2026-04-01 20:42 155  
[ ]SAMstats-L5787-HEK_ALX4_1_ALX4-FLAG_ChIP.2x36mers.unique.dedup2026-04-01 20:14 155  
[ ]SAMstats-L5788-HEK_ALX4_0.5_ALX4-FLAG_ChIP.1x36mers.unique2026-04-01 20:33 155  
[ ]SAMstats-L5788-HEK_ALX4_0.5_ALX4-FLAG_ChIP.2x36mers.unique2026-04-01 20:35 155  
[ ]SAMstats-L5788-HEK_ALX4_0.5_ALX4-FLAG_ChIP.2x36mers.unique.dedup2026-04-01 20:33 155  
[ ]SAMstats-L5789-HEK_ALX4_0.25_ALX4-FLAG_ChIP.1x36mers.unique2026-04-01 20:47 155  
[ ]SAMstats-L5789-HEK_ALX4_0.25_ALX4-FLAG_ChIP.2x36mers.unique2026-04-01 21:45 156  
[ ]SAMstats-L5789-HEK_ALX4_0.25_ALX4-FLAG_ChIP.2x36mers.unique.dedup2026-04-01 21:49 156  
[ ]SAMstats-L5790-HEK_ALX4_0.05_ALX4-FLAG_ChIP.1x36mers.unique2026-04-01 20:26 155  
[ ]SAMstats-L5790-HEK_ALX4_0.05_ALX4-FLAG_ChIP.2x36mers.unique2026-04-01 20:31 155  
[ ]SAMstats-L5790-HEK_ALX4_0.05_ALX4-FLAG_ChIP.2x36mers.unique.dedup2026-04-01 21:06 155  
[TXT]SampleSheet.csv2026-04-01 16:19 1.8K 
[ ]all.260331_NB551514_0429_AHF2NVBGY2.fastq.lines2026-04-01 17:24 11  
[TXT]bedRPKMfromBAM.sh2026-04-01 22:01 6.8K 
[ ]config2026-04-01 16:23 6.7K 
[TXT]macs2.sh2026-04-01 20:36 5.6K 
[TXT]makewiggle-stranded-2x36mers.sh2026-04-01 16:24 12K 
[TXT]map-1x36mers.sh2026-04-01 16:24 14K 
[TXT]map-2x36mers.sh2026-04-01 16:24 16K 
[TXT]run_spp.sh2026-04-01 16:24 3.4K 
[TXT]samtools-index-1x36mers.sh2026-04-01 16:24 2.6K 
[TXT]samtools-index-2x36mers.sh2026-04-01 16:24 5.4K 
[TXT]wigtobigwig-wigplusminus-2x36mers.sh2026-04-01 16:24 11K 
[ ]z2026-04-01 20:33 4.8K 
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