python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5010-HEK_GFP_1_Input.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5010-HEK_GFP_1_Input.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5010-HEK_GFP_1_Input.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5010-HEK_GFP_1_Input.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5040-HEK_GFP_1_SPI_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5040-HEK_GFP_1_SPI_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5040-HEK_GFP_1_SPI_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5040-HEK_GFP_1_SPI_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5041-HEK_SPI1_1_SPI_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5041-HEK_SPI1_1_SPI_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5041-HEK_SPI1_1_SPI_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5041-HEK_SPI1_1_SPI_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5042-HEK_SPI1_0.75_SPI_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5042-HEK_SPI1_0.75_SPI_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5042-HEK_SPI1_0.75_SPI_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5042-HEK_SPI1_0.75_SPI_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5043-HEK_SPI1_0.5_SPI_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5043-HEK_SPI1_0.5_SPI_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5043-HEK_SPI1_0.5_SPI_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5043-HEK_SPI1_0.5_SPI_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5044-HEK_SPI1_0.25_SPI_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5044-HEK_SPI1_0.25_SPI_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5044-HEK_SPI1_0.25_SPI_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5044-HEK_SPI1_0.25_SPI_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5045-HEK_SPI1_0.05_SPI_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5045-HEK_SPI1_0.05_SPI_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5045-HEK_SPI1_0.05_SPI_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5045-HEK_SPI1_0.05_SPI_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5046-HEK_SOX2_1_SOX_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5046-HEK_SOX2_1_SOX_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5046-HEK_SOX2_1_SOX_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5046-HEK_SOX2_1_SOX_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5047-HEK_SOX2_0.75_SOX_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5047-HEK_SOX2_0.75_SOX_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5047-HEK_SOX2_0.75_SOX_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5047-HEK_SOX2_0.75_SOX_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5048-HEK_SOX2_0.5_SOX_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5048-HEK_SOX2_0.5_SOX_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5048-HEK_SOX2_0.5_SOX_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5048-HEK_SOX2_0.5_SOX_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5049-HEK_SOX2_0.25_SOX_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5049-HEK_SOX2_0.25_SOX_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5049-HEK_SOX2_0.25_SOX_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5049-HEK_SOX2_0.25_SOX_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5050-HEK_SOX2_0.05_SOX_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5050-HEK_SOX2_0.05_SOX_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5050-HEK_SOX2_0.05_SOX_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5050-HEK_SOX2_0.05_SOX_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5051-HEK_IRF4_1_IRF4_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5051-HEK_IRF4_1_IRF4_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5051-HEK_IRF4_1_IRF4_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5051-HEK_IRF4_1_IRF4_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5052-HEK_IRF4_0.75_IRF4_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5052-HEK_IRF4_0.75_IRF4_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5052-HEK_IRF4_0.75_IRF4_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5052-HEK_IRF4_0.75_IRF4_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5053-HEK_IRF4_0.5_IRF4_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5053-HEK_IRF4_0.5_IRF4_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5053-HEK_IRF4_0.5_IRF4_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5053-HEK_IRF4_0.5_IRF4_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5054-HEK_IRF4_0.25_IRF4_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5054-HEK_IRF4_0.25_IRF4_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5054-HEK_IRF4_0.25_IRF4_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5054-HEK_IRF4_0.25_IRF4_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5055-HEK_IRF4_0.05_IRF4_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5055-HEK_IRF4_0.05_IRF4_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5055-HEK_IRF4_0.05_IRF4_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5055-HEK_IRF4_0.05_IRF4_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5056-HEK_LEF1_1_LEF1_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5056-HEK_LEF1_1_LEF1_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5056-HEK_LEF1_1_LEF1_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5056-HEK_LEF1_1_LEF1_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5057-HEK_LEF1_0.75_LEF1_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5057-HEK_LEF1_0.75_LEF1_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5057-HEK_LEF1_0.75_LEF1_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5057-HEK_LEF1_0.75_LEF1_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5058-HEK_LEF1_0.5_LEF1_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5058-HEK_LEF1_0.5_LEF1_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5058-HEK_LEF1_0.5_LEF1_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5058-HEK_LEF1_0.5_LEF1_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5059-HEK_LEF1_0.25_LEF1_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5059-HEK_LEF1_0.25_LEF1_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5059-HEK_LEF1_0.25_LEF1_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5059-HEK_LEF1_0.25_LEF1_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5060-HEK_LEF1_0.05_LEF1_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5060-HEK_LEF1_0.05_LEF1_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5060-HEK_LEF1_0.05_LEF1_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5060-HEK_LEF1_0.05_LEF1_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5061-HEK_ALX4_1_ALX4-FLAG_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5061-HEK_ALX4_1_ALX4-FLAG_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5061-HEK_ALX4_1_ALX4-FLAG_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5061-HEK_ALX4_1_ALX4-FLAG_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5062-HEK_ALX4_0.75_ALX4-FLAG_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5062-HEK_ALX4_0.75_ALX4-FLAG_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5062-HEK_ALX4_0.75_ALX4-FLAG_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5062-HEK_ALX4_0.75_ALX4-FLAG_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5063-HEK_ALX4_0.5_ALX4-FLAG_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5063-HEK_ALX4_0.5_ALX4-FLAG_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5063-HEK_ALX4_0.5_ALX4-FLAG_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5063-HEK_ALX4_0.5_ALX4-FLAG_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5064-HEK_ALX4_0.25_ALX4-FLAG_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5064-HEK_ALX4_0.25_ALX4-FLAG_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5064-HEK_ALX4_0.25_ALX4-FLAG_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5064-HEK_ALX4_0.25_ALX4-FLAG_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5065-HEK_ALX4_0.05_ALX4-FLAG_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5065-HEK_ALX4_0.05_ALX4-FLAG_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5065-HEK_ALX4_0.05_ALX4-FLAG_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5065-HEK_ALX4_0.05_ALX4-FLAG_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5066-HEK_SOX_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5066-HEK_SOX_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5066-HEK_SOX_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5066-HEK_SOX_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5067-HEK_IRF4_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5067-HEK_IRF4_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5067-HEK_IRF4_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5067-HEK_IRF4_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5068-HEK_LEF1_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5068-HEK_LEF1_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5068-HEK_LEF1_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5068-HEK_LEF1_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5069-HEK_ALX4-FLAG_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5069-HEK_ALX4-FLAG_ChIP.2x36mers.unique.dedup.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- L5069-HEK_ALX4-FLAG_ChIP.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L5069-HEK_ALX4-FLAG_ChIP.2x36mers.unique.dedup.minus.wig -notitle -RPM -uniqueBAM -stranded -