python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3752-Hanbang_Zhan_U-HP_NRSF.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3752-Hanbang_Zhan_U-HP_NRSF.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3753-Hanbang_Zhan_U-HP_NRSF.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3753-Hanbang_Zhan_U-HP_NRSF.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3754-Hanbang_Zhan_U-O_NRSF.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3754-Hanbang_Zhan_U-O_NRSF.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3755-Hanbang_Zhan_U-O_NRSF.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3755-Hanbang_Zhan_U-O_NRSF.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3756-Hanbang_Zhan_B-HP_NRSF.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3756-Hanbang_Zhan_B-HP_NRSF.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3757-Hanbang_Zhan_B-HP_NRSF.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3757-Hanbang_Zhan_B-HP_NRSF.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3758-Hanbang_Zhan_B-O_NRSF.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3758-Hanbang_Zhan_B-O_NRSF.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3759-Hanbang_Zhan_B-O_NRSF.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3759-Hanbang_Zhan_B-O_NRSF.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3905-K562_KLF1-PA5-86441.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3905-K562_KLF1-PA5-86441.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3906-Julia1_KLF1-PA5-86441.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3906-Julia1_KLF1-PA5-86441.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3907-K562_KLF1-NB100-1019.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3907-K562_KLF1-NB100-1019.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3908-Julia2_KLF1-NB100-1019.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3908-Julia2_KLF1-NB100-1019.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3909-Julia1_KLF1-H00010661.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3909-Julia1_KLF1-H00010661.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3910-Julia2_KLF1-H00010661.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3910-Julia2_KLF1-H00010661.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3915-K562_Input.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3915-K562_Input.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3916-Mkay_WT-1.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3916-Mkay_WT-1.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize
python /oak/stanford/groups/akundaje/marinovg/code/PEInsertDistFromBAM.py L3917-Mkay_WT-2.2x36mers.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes L3917-Mkay_WT-2.2x36mers.unique.dedup.InsertLength -uniqueBAM -normalize