/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3806-Julia_1_KLF1.2x36mers.unique.dedup.bam -c L3790-Julia_1_Input.2x36mers.unique.dedup.bam -n L3806-Julia_1_KLF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3807-Julia_2_KLF1.2x36mers.unique.dedup.bam -c L3791-Julia_2_Input.2x36mers.unique.dedup.bam -n L3807-Julia_2_KLF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3808-Julia_3_KLF1.2x36mers.unique.dedup.bam -c L3792-Julia_3_Input.2x36mers.unique.dedup.bam -n L3808-Julia_3_KLF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3809-Julia_4_KLF1.2x36mers.unique.dedup.bam -c L3793-Julia_4_Input.2x36mers.unique.dedup.bam -n L3809-Julia_4_KLF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3810-Julia_5_KLF1.2x36mers.unique.dedup.bam -c L3794-Julia_5_Input.2x36mers.unique.dedup.bam -n L3810-Julia_5_KLF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3811-Julia_6_KLF1.2x36mers.unique.dedup.bam -c L3795-Julia_6_Input.2x36mers.unique.dedup.bam -n L3811-Julia_6_KLF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3812-Julia_7_KLF1.2x36mers.unique.dedup.bam -c L3796-Julia_7_Input.2x36mers.unique.dedup.bam -n L3812-Julia_7_KLF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3813-Julia_8_KLF1.2x36mers.unique.dedup.bam -c L3797-Julia_8_Input.2x36mers.unique.dedup.bam -n L3813-Julia_8_KLF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3814-Julia_9_KLF1.2x36mers.unique.dedup.bam -c L3798-Julia_9_Input.2x36mers.unique.dedup.bam -n L3814-Julia_9_KLF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3815-Julia_10_KLF1.2x36mers.unique.dedup.bam -c L3799-Julia_10_Input.2x36mers.unique.dedup.bam -n L3815-Julia_10_KLF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3816-Julia_11_KLF1.2x36mers.unique.dedup.bam -c L3800-Julia_11_Input.2x36mers.unique.dedup.bam -n L3816-Julia_11_KLF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3817-Julia_12_KLF1.2x36mers.unique.dedup.bam -c L3801-Julia_12_Input.2x36mers.unique.dedup.bam -n L3817-Julia_12_KLF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3818-B-HP_NRSF1.2x36mers.unique.dedup.bam -c L3802-B-HP_Input.2x36mers.unique.dedup.bam -n L3818-B-HP_NRSF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3819-B-HP_NRSF1.2x36mers.unique.dedup.bam -c L3802-B-HP_Input.2x36mers.unique.dedup.bam -n L3819-B-HP_NRSF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3820-B-O_NRSF1.2x36mers.unique.dedup.bam -c L3803-B-O_Input.2x36mers.unique.dedup.bam -n L3820-B-O_NRSF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3821-B-O_NRSF1.2x36mers.unique.dedup.bam -c L3803-B-O_Input.2x36mers.unique.dedup.bam -n L3821-B-O_NRSF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3822-U-HP_NRSF1.2x36mers.unique.dedup.bam -c L3804-U-HP_Input.2x36mers.unique.dedup.bam -n L3822-U-HP_NRSF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3823-U-HP_NRSF1.2x36mers.unique.dedup.bam -c L3804-U-HP_Input.2x36mers.unique.dedup.bam -n L3823-U-HP_NRSF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3824-U-O_NRSF1.2x36mers.unique.dedup.bam -c L3805-U-O_Input.2x36mers.unique.dedup.bam -n L3824-U-O_NRSF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3825-U-O_NRSF1.2x36mers.unique.dedup.bam -c L3805-U-O_Input.2x36mers.unique.dedup.bam -n L3825-U-O_NRSF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE