Rscript ~/code/spp/spp_package/run_spp.R -c=L3748-GFP_ATF4.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3748-GFP_ATF4.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3749-GFP_ATF4.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3749-GFP_ATF4.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3750-ATF4_ATF4.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3750-ATF4_ATF4.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3751-ATF4_ATF4.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3751-ATF4_ATF4.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3752-Hanbang_Zhan_U-HP_NRSF.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3752-Hanbang_Zhan_U-HP_NRSF.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3753-Hanbang_Zhan_U-HP_NRSF.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3753-Hanbang_Zhan_U-HP_NRSF.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3754-Hanbang_Zhan_U-O_NRSF.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3754-Hanbang_Zhan_U-O_NRSF.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3755-Hanbang_Zhan_U-O_NRSF.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3755-Hanbang_Zhan_U-O_NRSF.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3756-Hanbang_Zhan_B-HP_NRSF.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3756-Hanbang_Zhan_B-HP_NRSF.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3757-Hanbang_Zhan_B-HP_NRSF.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3757-Hanbang_Zhan_B-HP_NRSF.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3758-Hanbang_Zhan_B-O_NRSF.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3758-Hanbang_Zhan_B-O_NRSF.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3759-Hanbang_Zhan_B-O_NRSF.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3759-Hanbang_Zhan_B-O_NRSF.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3760-K562_1pFA_KLF1.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3760-K562_1pFA_KLF1.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3761-K562_1pFA_KLF1.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3761-K562_1pFA_KLF1.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3764-K562_1pFA_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3764-K562_1pFA_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3765-GFP_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3765-GFP_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3766-ATF4_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3766-ATF4_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3767-Hanbang_Zhan_U-HP_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3767-Hanbang_Zhan_U-HP_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3768-Hanbang_Zhan_U-O_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3768-Hanbang_Zhan_U-O_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3769-Hanbang_Zhan_B-HP_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3769-Hanbang_Zhan_B-HP_Input.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3770-Hanbang_Zhan_B-O_Input.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3770-Hanbang_Zhan_B-O_Input.1x36mers.QC