/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3748-GFP_ATF4.2x36mers.unique.dedup.bam -c L3765-GFP_Input.2x36mers.unique.dedup.bam -n L3748-GFP_ATF4.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3749-GFP_ATF4.2x36mers.unique.dedup.bam -c L3765-GFP_Input.2x36mers.unique.dedup.bam -n L3749-GFP_ATF4.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3750-ATF4_ATF4.2x36mers.unique.dedup.bam -c L3766-ATF4_Input.2x36mers.unique.dedup.bam -n L3750-ATF4_ATF4.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3751-ATF4_ATF4.2x36mers.unique.dedup.bam -c L3766-ATF4_Input.2x36mers.unique.dedup.bam -n L3751-ATF4_ATF4.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3752-Hanbang_Zhan_U-HP_NRSF.2x36mers.unique.dedup.bam -c L3767-Hanbang_Zhan_U-HP_Input.2x36mers.unique.dedup.bam -n L3752-Hanbang_Zhan_U-HP_NRSF.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3753-Hanbang_Zhan_U-HP_NRSF.2x36mers.unique.dedup.bam -c L3767-Hanbang_Zhan_U-HP_Input.2x36mers.unique.dedup.bam -n L3753-Hanbang_Zhan_U-HP_NRSF.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3754-Hanbang_Zhan_U-O_NRSF.2x36mers.unique.dedup.bam -c L3768-Hanbang_Zhan_U-O_Input.2x36mers.unique.dedup.bam -n L3754-Hanbang_Zhan_U-O_NRSF.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3755-Hanbang_Zhan_U-O_NRSF.2x36mers.unique.dedup.bam -c L3768-Hanbang_Zhan_U-O_Input.2x36mers.unique.dedup.bam -n L3755-Hanbang_Zhan_U-O_NRSF.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3756-Hanbang_Zhan_B-HP_NRSF.2x36mers.unique.dedup.bam -c L3769-Hanbang_Zhan_B-HP_Input.2x36mers.unique.dedup.bam -n L3756-Hanbang_Zhan_B-HP_NRSF.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3757-Hanbang_Zhan_B-HP_NRSF.2x36mers.unique.dedup.bam -c L3769-Hanbang_Zhan_B-HP_Input.2x36mers.unique.dedup.bam -n L3757-Hanbang_Zhan_B-HP_NRSF.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3758-Hanbang_Zhan_B-O_NRSF.2x36mers.unique.dedup.bam -c L3770-Hanbang_Zhan_B-O_Input.2x36mers.unique.dedup.bam -n L3758-Hanbang_Zhan_B-O_NRSF.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3759-Hanbang_Zhan_B-O_NRSF.2x36mers.unique.dedup.bam -c L3770-Hanbang_Zhan_B-O_Input.2x36mers.unique.dedup.bam -n L3759-Hanbang_Zhan_B-O_NRSF.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3760-K562_1pFA_KLF1.2x36mers.unique.dedup.bam -c L3764-K562_1pFA_Input.2x36mers.unique.dedup.bam -n L3760-K562_1pFA_KLF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t L3761-K562_1pFA_KLF1.2x36mers.unique.dedup.bam -c L3764-K562_1pFA_Input.2x36mers.unique.dedup.bam -n L3761-K562_1pFA_KLF1.2x36mers.unique.dedup.MACS-2.1.0 -g hs -f BAMPE