Index of /kundaje/marinovg/oak/various/ENCODE4/CRISPR/2018-09-11-promoter-fine-mapping-screen

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]CTCF_FineMap_UMI_GenomicLowCovg_S8_L001_R1_001.fastq.gz2018-09-26 00:58 8.4K 
[ ]CTCF_FineMap_UMI_GenomicLowCovg_S8_L001_R2_001.fastq.gz2018-09-26 00:58 7.7K 
[ ]CTCF_FineMap_UMI_GenomicLowCovg_S8_L002_R1_001.fastq.gz2018-09-26 00:58 9.5K 
[ ]CTCF_FineMap_UMI_GenomicLowCovg_S8_L002_R2_001.fastq.gz2018-09-26 00:58 8.7K 
[ ]CTCF_FineMap_UMI_GenomicLowCovg_S8_L003_R1_001.fastq.gz2018-09-26 00:58 9.0K 
[ ]CTCF_FineMap_UMI_GenomicLowCovg_S8_L003_R2_001.fastq.gz2018-09-26 00:58 8.2K 
[ ]CTCF_FineMap_UMI_GenomicLowCovg_S8_L004_R1_001.fastq.gz2018-09-26 00:58 13K 
[ ]CTCF_FineMap_UMI_GenomicLowCovg_S8_L004_R2_001.fastq.gz2018-09-26 00:58 12K 
[ ]CTCF_FineMap_UMI_Plasmid2_S7_L001_R1_001.fastq.gz2018-09-26 00:58 39K 
[ ]CTCF_FineMap_UMI_Plasmid2_S7_L001_R2_001.fastq.gz2018-09-26 00:58 33K 
[ ]CTCF_FineMap_UMI_Plasmid2_S7_L002_R1_001.fastq.gz2018-09-26 00:58 40K 
[ ]CTCF_FineMap_UMI_Plasmid2_S7_L002_R2_001.fastq.gz2018-09-26 00:58 34K 
[ ]CTCF_FineMap_UMI_Plasmid2_S7_L003_R1_001.fastq.gz2018-09-26 00:58 40K 
[ ]CTCF_FineMap_UMI_Plasmid2_S7_L003_R2_001.fastq.gz2018-09-26 00:58 34K 
[ ]CTCF_FineMap_UMI_Plasmid2_S7_L004_R1_001.fastq.gz2018-09-26 00:58 41K 
[ ]CTCF_FineMap_UMI_Plasmid2_S7_L004_R2_001.fastq.gz2018-09-26 00:58 35K 
[DIR]DESeq/2018-09-28 06:48 -  
[TXT]JT-guides-20mers.txt2018-09-27 22:01 651  
[TXT]JT-guides.txt2018-09-27 21:51 744  
[DIR]Kaitlyn_lib/2018-10-19 15:56 -  
[DIR]TSS-library-sgRNAs-bowtie-indexes/2018-09-26 05:33 -  
[ ]TSS-library-sgRNAs.LenDist2018-09-26 05:29 51  
[TXT]TSS-library-sgRNAs.csv2018-09-26 01:04 5.3M 
[ ]TSS-library-sgRNAs.fa2018-09-26 05:29 5.3M 
[ ]TSS-library-sgRNAs.fa.tab2018-09-28 10:47 5.3M 
[TXT]TSS-library-sgRNAs.tsv2018-09-26 05:29 5.3M 
[ ]TSS-library-sgRNAs.with_CFD.files2018-09-28 10:44 84  
[ ]TSS-library-sgRNAs.with_CFD.table2018-10-19 17:39 5.5M 
[ ]TSS_screen.RPM.files2018-09-27 21:32 301  
[ ]TSS_screen.RPM.ratios.TSS-only.table2018-10-19 17:42 11M 
[ ]TSS_screen.RPM.ratios.filtered.table2019-03-07 19:13 13M 
[ ]TSS_screen.RPM.ratios.genes-only.table2018-10-19 17:42 2.1M 
[ ]TSS_screen.RPM.ratios.positive-controls-only.table2018-10-19 17:42 9.3K 
[ ]TSS_screen.RPM.ratios.safes-only.table2018-10-19 17:42 179K 
[ ]TSS_screen.RPM.ratios.table2018-10-19 17:39 13M 
[ ]TSS_screen.RPM.ratios.with_CFD.TSS-only.table2018-10-19 17:42 12M 
[ ]TSS_screen.RPM.ratios.with_CFD.files2018-09-28 10:37 589  
[ ]TSS_screen.RPM.ratios.with_CFD.genes-only.table2018-10-19 17:42 2.2M 
[ ]TSS_screen.RPM.ratios.with_CFD.positive-controls-only.table2018-10-19 17:42 9.8K 
[ ]TSS_screen.RPM.ratios.with_CFD.safes-only.table2018-10-19 17:42 191K 
[ ]TSS_screen.RPM.ratios.with_CFD.table2018-10-19 17:39 14M 
[ ]TSS_screen.RPM.table2018-10-19 17:32 8.4M 
[ ]TSS_screen.counts.files2018-09-27 21:32 301  
[ ]TSS_screen.counts.table2018-10-19 17:32 5.4M 
[DIR]TSS_screen_T07_BR1/2022-01-22 09:51 -  
[DIR]TSS_screen_T07_BR2/2022-01-22 09:51 -  
[DIR]TSS_screen_T21_BR1/2022-01-22 09:51 -  
[DIR]TSS_screen_T21_BR2/2022-01-22 09:51 -  
[ ]Tony_11_S1_L001_R1_001.fastq.gz2018-09-26 00:58 5.8M 
[ ]Tony_11_S1_L001_R2_001.fastq.gz2018-09-26 00:58 4.2M 
[ ]Tony_11_S1_L002_R1_001.fastq.gz2018-09-26 00:58 6.0M 
[ ]Tony_11_S1_L002_R2_001.fastq.gz2018-09-26 00:58 4.2M 
[ ]Tony_11_S1_L003_R1_001.fastq.gz2018-09-26 00:58 5.9M 
[ ]Tony_11_S1_L003_R2_001.fastq.gz2018-09-26 00:58 4.1M 
[ ]Tony_11_S1_L004_R1_001.fastq.gz2018-09-26 00:58 6.2M 
[ ]Tony_11_S1_L004_R2_001.fastq.gz2018-09-26 00:58 4.3M 
[ ]Tony_13_S2_L001_R1_001.fastq.gz2018-09-26 00:58 4.1M 
[ ]Tony_13_S2_L001_R2_001.fastq.gz2018-09-26 00:58 3.0M 
[ ]Tony_13_S2_L002_R1_001.fastq.gz2018-09-26 00:58 4.2M 
[ ]Tony_13_S2_L002_R2_001.fastq.gz2018-09-26 00:58 3.0M 
[ ]Tony_13_S2_L003_R1_001.fastq.gz2018-09-26 00:58 4.1M 
[ ]Tony_13_S2_L003_R2_001.fastq.gz2018-09-26 00:58 3.0M 
[ ]Tony_13_S2_L004_R1_001.fastq.gz2018-09-26 00:58 4.3M 
[ ]Tony_13_S2_L004_R2_001.fastq.gz2018-09-26 00:58 3.1M 
[ ]Undetermined_S0_L001_R1_001.fastq.gz2018-09-26 01:04 61M 
[ ]Undetermined_S0_L001_R2_001.fastq.gz2018-09-26 01:04 44M 
[ ]Undetermined_S0_L002_R1_001.fastq.gz2018-09-26 01:04 67M 
[ ]Undetermined_S0_L002_R2_001.fastq.gz2018-09-26 01:04 47M 
[ ]Undetermined_S0_L003_R1_001.fastq.gz2018-09-26 01:04 60M 
[ ]Undetermined_S0_L003_R2_001.fastq.gz2018-09-26 01:04 42M 
[ ]Undetermined_S0_L004_R1_001.fastq.gz2018-09-26 01:04 68M 
[ ]Undetermined_S0_L004_R2_001.fastq.gz2018-09-26 01:04 48M 
[TXT]barcodes.txt2018-09-26 00:58 47K 
[ ]effect-vs-CFD.zip2018-09-28 16:42 20M 
[TXT]hg38-male-GuideScan.JT-guides-20mers.txt2018-09-27 22:05 2.0K 
[TXT]hg38-male-GuideScan.JT-guides.txt2018-09-27 21:52 0  
[TXT]hg38-male-GuideScan.TSS-library-sgRNAs.csv2018-10-19 16:20 4.7M 
[TXT]hg38-male-GuideScan.TSS-library-sgRNAs.tsv2018-10-19 16:16 0  
[ ]promoter_elements_box_plots.zip2018-09-28 18:59 1.5M 
[TXT]reannotateTSSGuides.py2018-09-28 16:40 5.7K 
[ ]relative_effect-TSS_profile.zip2018-09-28 16:49 5.4M 
[ ]relative_effect.zip2018-09-28 16:42 5.7M 
[ ]replicate correlation.zip2018-09-28 16:41 13M 
[ ]z2018-09-28 18:46 17K 
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