Index of /kundaje/marinovg/oak/various/ENCODE4/CRISPR/2018-03-16-Cas13-redesign

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]Cas13-sgRNAs.GATA12018-03-31 15:05 25K 
[ ]Cas13-sgRNAs.GATA1.UT2018-03-31 15:05 4.4K 
[ ]Cas13-sgRNAs.K562-unexpressed.302018-03-31 15:07 274K 
[ ]Cas13-sgRNAs.MYC2018-03-31 15:05 243K 
[ ]Cas13-sgRNAs.MYC-GATA1-2kb-antisense2018-04-01 23:06 319K 
[ ]Cas13-sgRNAs.MYC-GATA1-2kb-sense2018-04-01 23:08 683K 
[ ]Cas13-sgRNAs.MYC-GATA1-cEnh2018-04-01 22:37 2.3M 
[ ]Cas13-sgRNAs.MYC.UT2018-03-31 15:05 8.5K 
[ ]Cas13-sgRNAs.Weissman_CRiNCL_2017.K562.mid302018-03-31 15:07 124K 
[ ]Cas13-sgRNAs.Weissman_CRiNCL_2017.K562.top30neg2018-03-31 15:13 413K 
[ ]Cas13-sgRNAs.Weissman_CRiNCL_2017.K562.top30pos2018-03-31 15:13 272K 
[ ]Cas13-sgRNAs.Weissman_genes_CRISPRi_combo.castle_effect0.min20TPM.first302018-03-31 15:10 614K 
[ ]Cas13-sgRNAs.Weissman_genes_CRISPRi_combo.top30neg2018-03-31 15:10 347K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA2018-04-01 23:08 5.5M 
[DIR]Cas13-sgRNAs.____final_set.no-rRNA-TopHat-2.0.8-GENCODEv25/2018-04-01 23:14 -  
[ ]Cas13-sgRNAs.____final_set.no-rRNA.fa2018-04-01 23:08 3.2M 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized2018-04-01 23:14 4.5M 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.GATA12018-04-01 23:16 17K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.GATA1.Nsg2.Narr702018-04-01 23:37 8.8K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.GATA1.Nsg3.Narr702018-04-01 23:37 12K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.GATA1.Nsg4.Narr702018-04-01 23:37 16K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.K562-unexpressed.302018-04-01 23:15 225K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.K562-unexpressed.30.Nsg2.Narr102018-04-01 23:37 47K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.K562-unexpressed.30.Nsg3.Narr102018-04-01 23:37 63K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.K562-unexpressed.30.Nsg4.Narr102018-04-01 23:37 80K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC2018-04-01 23:17 79K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC-GATA1-2kb-antisense2018-04-01 23:17 298K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC-GATA1-2kb-antisense.Nsg2.Narr502018-04-01 23:37 15K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC-GATA1-2kb-antisense.Nsg3.Narr502018-04-01 23:37 20K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC-GATA1-2kb-antisense.Nsg4.Narr502018-04-01 23:37 25K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC-GATA1-2kb-sense2018-04-01 23:18 663K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC-GATA1-2kb-sense.Nsg2.Narr10002018-04-01 23:37 295K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC-GATA1-2kb-sense.Nsg3.Narr10002018-04-01 23:37 391K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC-GATA1-2kb-sense.Nsg4.Narr10002018-04-01 23:37 487K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC-GATA1-cEnh2018-04-01 23:22 1.8M 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC-GATA1-cEnh.Nsg2.Narr252018-04-01 23:37 842K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC-GATA1-cEnh.Nsg3.Narr252018-04-01 23:37 1.1M 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC-GATA1-cEnh.Nsg4.Narr252018-04-01 23:37 1.3M 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC.Nsg2.Narr3002018-04-01 23:37 36K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC.Nsg3.Narr3002018-04-01 23:37 51K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.MYC.Nsg4.Narr3002018-04-01 23:37 66K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_CRiNCL_2017.K562.mid302018-04-01 23:22 87K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_CRiNCL_2017.K562.mid30.Nsg2.Narr102018-04-01 23:37 45K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_CRiNCL_2017.K562.mid30.Nsg3.Narr102018-04-01 23:37 60K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_CRiNCL_2017.K562.mid30.Nsg4.Narr102018-04-01 23:37 74K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_CRiNCL_2017.K562.top30neg2018-04-01 23:15 269K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_CRiNCL_2017.K562.top30neg.Nsg2.Narr102018-04-01 23:37 132K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_CRiNCL_2017.K562.top30neg.Nsg3.Narr102018-04-01 23:37 167K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_CRiNCL_2017.K562.top30neg.Nsg4.Narr102018-04-01 23:37 204K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_CRiNCL_2017.K562.top30pos2018-04-01 23:15 182K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_CRiNCL_2017.K562.top30pos.Nsg2.Narr102018-04-01 23:37 90K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_CRiNCL_2017.K562.top30pos.Nsg3.Narr102018-04-01 23:37 116K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_CRiNCL_2017.K562.top30pos.Nsg4.Narr102018-04-01 23:37 140K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_genes_CRISPRi_combo.castle_effect0.min20TPM.first302018-04-01 23:15 483K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_genes_CRISPRi_combo.castle_effect0.min20TPM.first30.Nsg2.Narr102018-04-01 23:37 57K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_genes_CRISPRi_combo.castle_effect0.min20TPM.first30.Nsg3.Narr102018-04-01 23:37 75K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_genes_CRISPRi_combo.castle_effect0.min20TPM.first30.Nsg4.Narr102018-04-01 23:37 92K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_genes_CRISPRi_combo.top30neg2018-04-01 23:15 276K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_genes_CRISPRi_combo.top30neg.Nsg2.Narr102018-04-01 23:37 44K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_genes_CRISPRi_combo.top30neg.Nsg3.Narr102018-04-01 23:37 58K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.Weissman_genes_CRISPRi_combo.top30neg.Nsg4.Narr102018-04-01 23:37 72K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.tiling_screen_safes2018-04-01 23:15 34K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.tiling_screen_safes.Nsg2.Narr5002018-04-01 23:37 61K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.tiling_screen_safes.Nsg3.Narr5002018-04-01 23:37 85K 
[ ]Cas13-sgRNAs.____final_set.no-rRNA.finalized.Cas13-sgRNAs.tiling_screen_safes.Nsg4.Narr5002018-04-01 23:37 110K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized2018-03-31 15:23 741K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.J01866.1-5.8S2018-04-01 21:54 11K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.J01866.1-5.8S-antisense2018-04-01 21:36 2.2K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.J01866.1-5.8S-antisense.Nsg2.Narr102018-04-01 21:54 2.7K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.J01866.1-5.8S-antisense.Nsg3.Narr102018-04-01 21:54 3.7K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.J01866.1-5.8S-antisense.Nsg4.Narr102018-04-01 21:54 4.6K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.J01866.1-5.8S.Nsg2.Narr502018-04-01 21:54 12K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.J01866.1-5.8S.Nsg3.Narr502018-04-01 21:54 17K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.J01866.1-5.8S.Nsg4.Narr502018-04-01 21:54 21K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.M11167.1-28S2018-04-01 21:54 192K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.M11167.1-28S-antisense2018-04-01 21:36 23K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.M11167.1-28S-antisense.Nsg2.Narr502018-04-01 21:54 14K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.M11167.1-28S-antisense.Nsg3.Narr502018-04-01 21:54 19K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.M11167.1-28S-antisense.Nsg4.Narr502018-04-01 21:54 25K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.M11167.1-28S.Nsg2.Narr5002018-04-01 21:54 127K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.M11167.1-28S.Nsg3.Narr5002018-04-01 21:54 182K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.M11167.1-28S.Nsg4.Narr5002018-04-01 21:54 236K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.U13369.1-Human_ribosomal_DNA_complete_repeating_unit2018-04-01 21:53 249K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.U13369.1-Human_ribosomal_DNA_complete_repeating_unit-antisense2018-04-01 21:38 32K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.U13369.1-Human_ribosomal_DNA_complete_repeating_unit-antisense.Nsg2.Narr502018-04-01 21:54 15K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.U13369.1-Human_ribosomal_DNA_complete_repeating_unit-antisense.Nsg3.Narr502018-04-01 21:54 19K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.U13369.1-Human_ribosomal_DNA_complete_repeating_unit-antisense.Nsg4.Narr502018-04-01 21:54 25K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.U13369.1-Human_ribosomal_DNA_complete_repeating_unit.Nsg2.Narr15002018-04-01 21:54 399K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.U13369.1-Human_ribosomal_DNA_complete_repeating_unit.Nsg3.Narr15002018-04-01 21:54 539K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.U13369.1-Human_ribosomal_DNA_complete_repeating_unit.Nsg4.Narr15002018-04-01 21:54 681K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.X03205.1-18S2018-04-01 21:52 190K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.X03205.1-18S-antisense2018-04-01 21:38 22K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.X03205.1-18S-antisense.Nsg2.Narr502018-04-01 21:54 14K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.X03205.1-18S-antisense.Nsg3.Narr502018-04-01 21:54 19K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.X03205.1-18S-antisense.Nsg4.Narr502018-04-01 21:54 25K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.X03205.1-18S.Nsg2.Narr5002018-04-01 21:54 128K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.X03205.1-18S.Nsg3.Narr5002018-04-01 21:54 183K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.X03205.1-18S.Nsg4.Narr5002018-04-01 21:54 238K 
[ ]Cas13-sgRNAs.____final_set.wanted.rRNA.finalized.hist2018-04-01 21:33 460  
[ ]Cas13-sgRNAs.tiling_screen_safes2018-03-31 15:05 40K 
[ ]GFP-mCherry.1.ebwt2018-04-02 06:21 4.0M 
[ ]GFP-mCherry.2.ebwt2018-04-02 06:21 272  
[ ]GFP-mCherry.3.ebwt2018-04-02 06:21 35  
[ ]GFP-mCherry.4.ebwt2018-04-02 06:21 535  
[ ]GFP-mCherry.all2018-04-02 06:22 162K 
[DIR]GFP-mCherry.all-TopHat-2.0.8-GENCODEv25/2018-04-02 06:26 -  
[ ]GFP-mCherry.all.fa2018-04-02 06:23 107K 
[ ]GFP-mCherry.all.finalized2018-04-02 06:26 214K 
[ ]GFP-mCherry.all.finalized.eGFP2018-04-02 07:04 74K 
[ ]GFP-mCherry.all.finalized.mCherry2018-04-02 07:04 83K 
[ ]GFP-mCherry.all.finalized.mCherry.Nsg3.Narr102018-04-02 07:53 846K 
[ ]GFP-mCherry.all.finalized.mCherry.Nsg3.Narr10.shuffled2018-04-02 07:53 846K 
[ ]GFP-mCherry.all.finalized.mCherry.Nsg4.Narr102018-04-02 07:53 1.0M 
[ ]GFP-mCherry.all.finalized.mCherry.Nsg4.Narr10.shuffled2018-04-02 07:53 1.0M 
[ ]GFP-mCherry.all.finalized.msfGFP2018-04-02 07:04 58K 
[ ]GFP-mCherry.all.finalized.subsample52018-04-02 07:10 716  
[ ]GFP-mCherry.all.finalized.subsample5.del12018-04-02 07:30 23K 
[ ]GFP-mCherry.all.finalized.subsample5.del22018-04-02 07:30 45K 
[ ]GFP-mCherry.all.finalized.subsample5.del32018-04-02 07:30 66K 
[ ]GFP-mCherry.all.finalized.subsample5.del42018-04-02 07:30 86K 
[ ]GFP-mCherry.all.finalized.subsample5.del52018-04-02 07:30 105K 
[ ]GFP-mCherry.all.finalized.subsample5.ins12018-04-02 07:30 93K 
[ ]GFP-mCherry.all.finalized.subsample5.ins22018-04-02 07:30 318K 
[ ]GFP-mCherry.all.finalized.subsample5.ins32018-04-02 07:30 754K 
[ ]GFP-mCherry.all.finalized.subsample5.ins42018-04-02 07:31 1.5M 
[ ]GFP-mCherry.all.finalized.subsample5.ins52018-04-02 07:31 2.6M 
[ ]GFP-mCherry.all.finalized.subsample5.mm12018-04-02 07:32 69K 
[ ]GFP-mCherry.all.finalized.subsample5.mm22018-04-02 07:32 195K 
[ ]GFP-mCherry.all.finalized.subsample5.mm2-combinatorial2018-04-02 07:45 2.7M 
[ ]GFP-mCherry.all.finalized.subsample5.mm32018-04-02 07:32 368K 
[ ]GFP-mCherry.all.finalized.subsample5.mm42018-04-02 07:32 580K 
[ ]GFP-mCherry.all.finalized.subsample5.mm4-combinatorial2018-04-02 07:46 11M 
[ ]GFP-mCherry.all.finalized.subsample5.mm52018-04-02 07:32 817K 
[ ]GFP-mCherry.all.finalized.subsample102018-04-02 07:08 1.3K 
[ ]GFP-mCherry.chrom.sizes2018-04-02 06:21 32  
[ ]GFP-mCherry.fa2018-04-02 06:04 2.1K 
[ ]GFP-mCherry.gtf2018-04-02 06:21 352  
[ ]GFP-mCherry.rev.1.ebwt2018-04-02 06:21 4.0M 
[ ]GFP-mCherry.rev.2.ebwt2018-04-02 06:21 272  
[ ]K562.genes.TPM.protein_coding.unexpressed.first302018-03-31 14:38 11K 
[ ]final.Cas13-sgRNAs-array-2sgRNA.non-rRNA2018-04-01 23:38 1.6M 
[ ]final.Cas13-sgRNAs-array-2sgRNA.rRNA2018-04-01 23:38 710K 
[ ]final.Cas13-sgRNAs-array-3sgRNA.non-rRNA2018-04-01 23:38 2.1M 
[ ]final.Cas13-sgRNAs-array-3sgRNA.rRNA2018-04-01 23:38 1.0M 
[ ]final.Cas13-sgRNAs-array-4sgRNA.non-rRNA2018-04-01 23:38 2.7M 
[ ]final.Cas13-sgRNAs-array-4sgRNA.rRNA2018-04-01 23:38 1.2M 
[ ]gencode.v25.annotation.genes-transcripts.GATA12018-03-31 14:38 106  
[ ]gencode.v25.annotation.genes-transcripts.MYC2018-03-31 14:38 49  
[ ]gencode.v25.annotation.genes.MYC-GATA12018-03-31 14:38 100  
[ ]gencode.v25.annotation.genes.MYC-GATA1-2kb-antisense.genes-transcripts2018-03-31 14:38 152  
[ ]gencode.v25.annotation.genes.MYC-GATA1-2kb-sense-antisense.genes-transcripts2018-03-31 14:38 317  
[ ]gencode.v25.annotation.genes.MYC-GATA1-2kb-sense-antisense.gtf2018-03-31 14:38 744  
[ ]gencode.v25.annotation.genes.MYC-GATA1-2kb-sense.genes-transcripts2018-03-31 14:38 120  
[ ]gencode.v25.annotation.genes.MYC-GATA1-cEnh.genes-transcripts2018-03-31 14:38 24K 
[ ]gencode.v25.annotation.genes.MYC-GATA1-cEnh.gtf2018-03-31 14:38 46K 
[ ]tiling_screen_safes.hg20-liftOver.50bp-length.genes-transcripts2018-03-31 14:38 113K 
[ ]tiling_screen_safes.hg20-liftOver.50bp-length.gtf2018-03-31 14:38 212K 
[ ]z2018-04-02 06:27 30K 
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