Rscript ~/code/spp/spp_package/run_spp.R -c=L5486-AS_NRSF.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5486-AS_NRSF.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5487-HS_NRSF.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5487-HS_NRSF.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5488-UT_NRSF.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5488-UT_NRSF.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5489-HEK_SPI1_0.75_SPI_ChIP.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5489-HEK_SPI1_0.75_SPI_ChIP.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5490-HEK_SOX2_0.75_SOX_ChIP.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5490-HEK_SOX2_0.75_SOX_ChIP.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5491-HEK_IRF4_0.75_IRF4_ChIP.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5491-HEK_IRF4_0.75_IRF4_ChIP.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5492-HEK_LEF1_0.75_LEF1_ChIP.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5492-HEK_LEF1_0.75_LEF1_ChIP.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L5493-HEK_ALX4_0.75_ALX4-FLAG_ChIP.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L5493-HEK_ALX4_0.75_ALX4-FLAG_ChIP.1x36mers.QC