Index of /kundaje/marinovg/oak/various/ENCODE4/ATAC/2025-11-25-Hanbang-ATAC-analysis

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]AR14-AS-L3925-L3926.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:48 1.4M 
[ ]AR14-AS-L3925-L3926.merged.bam2025-12-01 15:23 4.2G 
[ ]AR14-AS-L3925-L3926.merged.bam.bai2025-12-01 16:40 7.1M 
[ ]AR14-AS-L3925-L3926.merged.bigWig2025-12-01 18:57 619M 
[ ]AR14-HS-L3928-L3929.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:52 1.8M 
[ ]AR14-HS-L3928-L3929.merged.bam2025-12-01 15:28 5.8G 
[ ]AR14-HS-L3928-L3929.merged.bam.bai2025-12-01 16:40 7.3M 
[ ]AR14-HS-L3928-L3929.merged.bigWig2025-12-01 19:00 816M 
[ ]AR14-UT-L3922-L3923.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:45 1.1M 
[ ]AR14-UT-L3922-L3923.merged.bam2025-12-01 15:16 2.9G 
[ ]AR14-UT-L3922-L3923.merged.bam.bai2025-12-01 16:40 6.6M 
[ ]AR14-UT-L3922-L3923.merged.bigWig2025-12-01 18:56 407M 
[ ]DC-SIGN-AS-L3934-L3935.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:43 1.5M 
[ ]DC-SIGN-AS-L3934-L3935.merged.bam2025-12-01 15:07 1.4G 
[ ]DC-SIGN-AS-L3934-L3935.merged.bam.bai2025-12-01 16:39 6.2M 
[ ]DC-SIGN-AS-L3934-L3935.merged.bigWig2025-12-01 18:56 228M 
[ ]DC-SIGN-HS-L3937-L3938.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:43 1.8M 
[ ]DC-SIGN-HS-L3937-L3938.merged.bam2025-12-01 15:07 1.3G 
[ ]DC-SIGN-HS-L3937-L3938.merged.bam.bai2025-12-01 16:39 6.1M 
[ ]DC-SIGN-HS-L3937-L3938.merged.bigWig2025-12-01 18:56 201M 
[ ]DC-SIGN-UT-L3931-L3932-L3933.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:50 2.0M 
[ ]DC-SIGN-UT-L3931-L3932-L3933.merged.bam2025-12-01 15:20 4.3G 
[ ]DC-SIGN-UT-L3931-L3932-L3933.merged.bam.bai2025-12-01 16:40 7.1M 
[ ]DC-SIGN-UT-L3931-L3932-L3933.merged.bigWig2025-12-01 18:59 694M 
[ ]M1-AS-L4361-L4362-L4363.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:46 2.8M 
[ ]M1-AS-L4361-L4362-L4363.merged.bam2025-12-01 15:16 3.1G 
[ ]M1-AS-L4361-L4362-L4363.merged.bam.bai2025-12-01 16:40 6.4M 
[ ]M1-AS-L4361-L4362-L4363.merged.bigWig2025-12-01 18:57 420M 
[ ]M1-HS-L4364-L4365-L4366.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:47 3.0M 
[ ]M1-HS-L4364-L4365-L4366.merged.bam2025-12-01 15:14 3.3G 
[ ]M1-HS-L4364-L4365-L4366.merged.bam.bai2025-12-01 16:40 6.4M 
[ ]M1-HS-L4364-L4365-L4366.merged.bigWig2025-12-01 18:57 436M 
[ ]M1-UT-L4358-L4359-L4360.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:46 2.8M 
[ ]M1-UT-L4358-L4359-L4360.merged.bam2025-12-01 15:16 2.9G 
[ ]M1-UT-L4358-L4359-L4360.merged.bam.bai2025-12-01 16:40 6.5M 
[ ]M1-UT-L4358-L4359-L4360.merged.bigWig2025-12-01 18:57 433M 
[ ]M2-AS-Rep1-L4370-L4371-L4372.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:52 4.0M 
[ ]M2-AS-Rep1-L4370-L4371-L4372.merged.bam2025-12-01 15:21 5.0G 
[ ]M2-AS-Rep1-L4370-L4371-L4372.merged.bam.bai2025-12-01 16:40 6.6M 
[ ]M2-AS-Rep1-L4370-L4371-L4372.merged.bigWig2025-12-01 18:57 699M 
[ ]M2-AS-Rep2-L4404-L4405-L4406-L4407.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:42 2.5M 
[ ]M2-AS-Rep2-L4404-L4405-L4406-L4407.merged.bam2025-12-01 15:08 1.7G 
[ ]M2-AS-Rep2-L4404-L4405-L4406-L4407.merged.bam.bai2025-12-01 16:39 6.2M 
[ ]M2-AS-Rep2-L4404-L4405-L4406-L4407.merged.bigWig2025-12-01 18:56 261M 
[ ]M2-HS-Rep1-L4373-L4374-L4375.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:52 3.8M 
[ ]M2-HS-Rep1-L4373-L4374-L4375.merged.bam2025-12-01 15:21 4.8G 
[ ]M2-HS-Rep1-L4373-L4374-L4375.merged.bam.bai2025-12-01 16:40 6.5M 
[ ]M2-HS-Rep1-L4373-L4374-L4375.merged.bigWig2025-12-01 18:57 667M 
[ ]M2-HS-Rep2-L4408-L4409-L4410-L4411.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:44 3.0M 
[ ]M2-HS-Rep2-L4408-L4409-L4410-L4411.merged.bam2025-12-01 15:11 2.4G 
[ ]M2-HS-Rep2-L4408-L4409-L4410-L4411.merged.bam.bai2025-12-01 16:39 6.5M 
[ ]M2-HS-Rep2-L4408-L4409-L4410-L4411.merged.bigWig2025-12-01 18:56 369M 
[ ]M2-UT-Rep1-L4367-L4368-L4369.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:50 3.8M 
[ ]M2-UT-Rep1-L4367-L4368-L4369.merged.bam2025-12-01 15:18 4.3G 
[ ]M2-UT-Rep1-L4367-L4368-L4369.merged.bam.bai2025-12-01 16:40 6.5M 
[ ]M2-UT-Rep1-L4367-L4368-L4369.merged.bigWig2025-12-01 18:57 631M 
[ ]M2-UT-Rep2-L4400-L4401-L4402-L4403.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:40 1.8M 
[ ]M2-UT-Rep2-L4400-L4401-L4402-L4403.merged.bam2025-12-01 15:05 1.0G 
[ ]M2-UT-Rep2-L4400-L4401-L4402-L4403.merged.bam.bai2025-12-01 16:39 6.0M 
[ ]M2-UT-Rep2-L4400-L4401-L4402-L4403.merged.bigWig2025-12-01 18:55 159M 
[ ]MACS2025-12-01 17:28 1.3K 
[ ]MACS-region-stats2025-12-01 17:28 1.7K 
[ ]MACS2.RPM.400bp-merged.400bp-radius.RPM.table.PCA.PCs2025-12-01 22:23 1.4K 
[ ]MACS2.RPM.400bp-merged.400bp-radius.RPM.table.PCA.variance_explained2025-12-01 22:23 405  
[ ]MACS2.RPM.400bp-merged.400bp-radius.RPM.table.UMAP2025-12-01 22:24 1.0K 
[ ]MACS2.RPM.400bp-merged.400bp-radius.RPM.table.UMAP.top50K2025-12-01 22:24 966  
[ ]MACS2.peaks.RPM.200merge.500bp.table2025-12-01 17:29 35M 
[ ]MACS2.peaks.RPM.400merge.400bp.RPM.files2025-12-01 14:29 1.9K 
[ ]MACS2.peaks.RPM.400merge.400bp.RPM.table2025-12-01 18:55 154M 
[ ]MACS2.peaks.RPM.400merge.400bp.readcounts.files2025-12-01 14:30 2.0K 
[ ]MACS2.peaks.RPM.400merge.400bp.readcounts.table2025-12-01 18:55 60M 
[ ]MACS2.peaks.RPM.400merge.400bp.table2025-12-01 17:29 31M 
[ ]MACS2.peaks.RPM.500merge.200bp.table2025-12-01 17:29 30M 
[ ]MACS2.peaks.RPM.500merge.500bp.table2025-12-01 17:29 30M 
[ ]MACS2.peaks.RPM.files2025-12-01 14:27 2.1K 
[ ]MDM-M2-AS-L3984-L3985-L3986.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:44 3.2M 
[ ]MDM-M2-AS-L3984-L3985-L3986.merged.bam2025-12-01 15:11 2.0G 
[ ]MDM-M2-AS-L3984-L3985-L3986.merged.bam.bai2025-12-01 16:39 6.1M 
[ ]MDM-M2-AS-L3984-L3985-L3986.merged.bigWig2025-12-01 18:56 333M 
[ ]MDM-M2-HS-L3987-L3988-L3989.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:44 3.7M 
[ ]MDM-M2-HS-L3987-L3988-L3989.merged.bam2025-12-01 15:11 1.9G 
[ ]MDM-M2-HS-L3987-L3988-L3989.merged.bam.bai2025-12-01 16:39 5.9M 
[ ]MDM-M2-HS-L3987-L3988-L3989.merged.bigWig2025-12-01 18:56 284M 
[ ]MDM-M2-UT-L3982.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:44 3.9M 
[ ]MDM-M2-UT-L3982.merged.bam2025-12-01 15:13 2.2G 
[ ]MDM-M2-UT-L3982.merged.bam.bai2025-12-01 16:39 6.0M 
[ ]MDM-M2-UT-L3982.merged.bigWig2025-12-01 18:56 320M 
[ ]THP_1_M2-AS-L3943-L3945.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:41 1.8M 
[ ]THP_1_M2-AS-L3943-L3945.merged.bam2025-12-01 15:05 1.0G 
[ ]THP_1_M2-AS-L3943-L3945.merged.bam.bai2025-12-01 16:39 6.0M 
[ ]THP_1_M2-AS-L3943-L3945.merged.bigWig2025-12-01 18:55 162M 
[ ]THP_1_M2-HS-L3947-L3948.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:46 2.6M 
[ ]THP_1_M2-HS-L3947-L3948.merged.bam2025-12-01 15:06 1.0G 
[ ]THP_1_M2-HS-L3947-L3948.merged.bam.bai2025-12-01 16:39 6.0M 
[ ]THP_1_M2-HS-L3947-L3948.merged.bigWig2025-12-01 18:55 140M 
[ ]THP_1_M2-UT-L3940-L3941.merged.MACS2-PE_peaks.narrowPeak.gz2025-12-01 16:42 2.6M 
[ ]THP_1_M2-UT-L3940-L3941.merged.bam2025-12-01 15:07 1.3G 
[ ]THP_1_M2-UT-L3940-L3941.merged.bam.bai2025-12-01 16:39 6.1M 
[ ]THP_1_M2-UT-L3940-L3941.merged.bigWig2025-12-01 18:56 206M 
[ ]z2025-12-13 20:27 14K 
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