## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L4166-K562_1p_FA.2x36mers.hg38-male.unique.bam] OUTPUT=L4166-K562_1p_FA.2x36mers.hg38-male.unique.dedup.bam METRICS_FILE=L4166-K562_1p_FA.2x36mers.hg38-male.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Sep 15 18:45:10 PDT 2025

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	5332751	7826882	0	290405	65106	0.054457	59811882

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.011817
2.0	1.937326
3.0	2.78389
4.0	3.558242
5.0	4.266542
6.0	4.914425
7.0	5.507043
8.0	6.049111
9.0	6.544941
10.0	6.998477
11.0	7.413327
12.0	7.79279
13.0	8.139884
14.0	8.457372
15.0	8.747779
16.0	9.013413
17.0	9.256389
18.0	9.47864
19.0	9.681932
20.0	9.867884
21.0	10.037974
22.0	10.193556
23.0	10.335866
24.0	10.466038
25.0	10.585105
26.0	10.694017
27.0	10.793638
28.0	10.884762
29.0	10.968113
30.0	11.044354
31.0	11.114091
32.0	11.17788
33.0	11.236228
34.0	11.289599
35.0	11.338418
36.0	11.383072
37.0	11.423917
38.0	11.461278
39.0	11.495452
40.0	11.526711
41.0	11.555304
42.0	11.581458
43.0	11.605381
44.0	11.627263
45.0	11.647279
46.0	11.665587
47.0	11.682334
48.0	11.697652
49.0	11.711664
50.0	11.72448
51.0	11.736203
52.0	11.746927
53.0	11.756735
54.0	11.765707
55.0	11.773914
56.0	11.78142
57.0	11.788286
58.0	11.794567
59.0	11.800312
60.0	11.805566
61.0	11.810373
62.0	11.81477
63.0	11.818791
64.0	11.82247
65.0	11.825834
66.0	11.828912
67.0	11.831727
68.0	11.834302
69.0	11.836658
70.0	11.838812
71.0	11.840783
72.0	11.842585
73.0	11.844234
74.0	11.845742
75.0	11.847122
76.0	11.848384
77.0	11.849538
78.0	11.850594
79.0	11.85156
80.0	11.852443
81.0	11.853251
82.0	11.85399
83.0	11.854666
84.0	11.855284
85.0	11.85585
86.0	11.856367
87.0	11.856841
88.0	11.857274
89.0	11.85767
90.0	11.858032
91.0	11.858363
92.0	11.858666
93.0	11.858943
94.0	11.859197
95.0	11.859429
96.0	11.859641
97.0	11.859835
98.0	11.860012
99.0	11.860175
100.0	11.860323