## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L4155-K562_0.1p_FA.2x36mers.hg38-male.unique.bam] OUTPUT=L4155-K562_0.1p_FA.2x36mers.hg38-male.unique.dedup.bam METRICS_FILE=L4155-K562_0.1p_FA.2x36mers.hg38-male.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Sep 15 18:45:09 PDT 2025

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	12381051	9887142	0	589724	160261	0.047631	169779356

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.012642
2.0	1.954065
3.0	2.82928
4.0	3.642941
5.0	4.399379
6.0	5.102617
7.0	5.756397
8.0	6.364198
9.0	6.929253
10.0	7.454568
11.0	7.942938
12.0	8.396962
13.0	8.819055
14.0	9.211462
15.0	9.576272
16.0	9.915426
17.0	10.230727
18.0	10.523853
19.0	10.796364
20.0	11.04971
21.0	11.285238
22.0	11.504201
23.0	11.707766
24.0	11.897013
25.0	12.072952
26.0	12.236516
27.0	12.388578
28.0	12.529945
29.0	12.66137
30.0	12.783552
31.0	12.897141
32.0	13.002741
33.0	13.100915
34.0	13.192184
35.0	13.277034
36.0	13.355917
37.0	13.429252
38.0	13.49743
39.0	13.560813
40.0	13.619738
41.0	13.674519
42.0	13.725447
43.0	13.772794
44.0	13.81681
45.0	13.857732
46.0	13.895775
47.0	13.931142
48.0	13.964023
49.0	13.99459
50.0	14.023008
51.0	14.049428
52.0	14.073989
53.0	14.096823
54.0	14.118051
55.0	14.137787
56.0	14.156134
57.0	14.173191
58.0	14.189048
59.0	14.20379
60.0	14.217495
61.0	14.230237
62.0	14.242082
63.0	14.253094
64.0	14.263332
65.0	14.27285
66.0	14.281698
67.0	14.289924
68.0	14.297572
69.0	14.304681
70.0	14.311291
71.0	14.317436
72.0	14.323149
73.0	14.32846
74.0	14.333397
75.0	14.337987
76.0	14.342254
77.0	14.346222
78.0	14.34991
79.0	14.353339
80.0	14.356526
81.0	14.35949
82.0	14.362245
83.0	14.364806
84.0	14.367187
85.0	14.369401
86.0	14.371459
87.0	14.373372
88.0	14.375151
89.0	14.376805
90.0	14.378342
91.0	14.379771
92.0	14.3811
93.0	14.382335
94.0	14.383484
95.0	14.384551
96.0	14.385544
97.0	14.386467
98.0	14.387324
99.0	14.388122
100.0	14.388863