## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L4152-K562_native.2x36mers.hg38-male.unique.bam] OUTPUT=L4152-K562_native.2x36mers.hg38-male.unique.dedup.bam METRICS_FILE=L4152-K562_native.2x36mers.hg38-male.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Sep 15 18:45:09 PDT 2025

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	19104146	38306696	0	871415	280898	0.045614	293695997

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.014443
2.0	1.964999
3.0	2.855693
4.0	3.690293
5.0	4.472333
6.0	5.205122
7.0	5.891762
8.0	6.53516
9.0	7.138039
10.0	7.70295
11.0	8.232285
12.0	8.728284
13.0	9.193047
14.0	9.62854
15.0	10.036607
16.0	10.418976
17.0	10.777264
18.0	11.112988
19.0	11.427569
20.0	11.722339
21.0	11.998546
22.0	12.257357
23.0	12.49987
24.0	12.72711
25.0	12.940039
26.0	13.139558
27.0	13.326512
28.0	13.501693
29.0	13.665841
30.0	13.819651
31.0	13.963775
32.0	14.098823
33.0	14.225366
34.0	14.343939
35.0	14.455045
36.0	14.559154
37.0	14.656706
38.0	14.748115
39.0	14.833768
40.0	14.914026
41.0	14.989229
42.0	15.059697
43.0	15.125727
44.0	15.187598
45.0	15.245573
46.0	15.299897
47.0	15.3508
48.0	15.398497
49.0	15.44319
50.0	15.485069
51.0	15.52431
52.0	15.56108
53.0	15.595534
54.0	15.627819
55.0	15.65807
56.0	15.686416
57.0	15.712977
58.0	15.737865
59.0	15.761186
60.0	15.783038
61.0	15.803514
62.0	15.822701
63.0	15.840679
64.0	15.857525
65.0	15.87331
66.0	15.888101
67.0	15.901961
68.0	15.914947
69.0	15.927116
70.0	15.938519
71.0	15.949203
72.0	15.959214
73.0	15.968595
74.0	15.977386
75.0	15.985622
76.0	15.99334
77.0	16.000572
78.0	16.007348
79.0	16.013698
80.0	16.019648
81.0	16.025223
82.0	16.030447
83.0	16.035342
84.0	16.039929
85.0	16.044226
86.0	16.048254
87.0	16.052027
88.0	16.055563
89.0	16.058876
90.0	16.061981
91.0	16.06489
92.0	16.067616
93.0	16.07017
94.0	16.072563
95.0	16.074806
96.0	16.076907
97.0	16.078877
98.0	16.080722
99.0	16.08245
100.0	16.08407