## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[BAF170_2.2x36mers.hg38+mm10.unique.nochrM.bam] OUTPUT=BAF170_2.2x36mers.hg38+mm10.unique.nochrM.dedup.bam METRICS_FILE=BAF170_2.2x36mers.hg38+mm10.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Thu May 27 19:43:32 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	1412836	0	0	161826	19911	0.11454	6363270

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.012767
2.0	1.823883
3.0	2.473499
4.0	2.993771
5.0	3.410453
6.0	3.744169
7.0	4.01144
8.0	4.225495
9.0	4.39693
10.0	4.53423
11.0	4.644193
12.0	4.732261
13.0	4.802795
14.0	4.859284
15.0	4.904526
16.0	4.94076
17.0	4.969779
18.0	4.99302
19.0	5.011634
20.0	5.026542
21.0	5.038481
22.0	5.048043
23.0	5.055702
24.0	5.061835
25.0	5.066747
26.0	5.070681
27.0	5.073832
28.0	5.076356
29.0	5.078377
30.0	5.079995
31.0	5.081292
32.0	5.08233
33.0	5.083161
34.0	5.083827
35.0	5.084361
36.0	5.084788
37.0	5.08513
38.0	5.085404
39.0	5.085623
40.0	5.085799
41.0	5.08594
42.0	5.086053
43.0	5.086143
44.0	5.086215
45.0	5.086273
46.0	5.08632
47.0	5.086357
48.0	5.086386
49.0	5.08641
50.0	5.086429
51.0	5.086445
52.0	5.086457
53.0	5.086467
54.0	5.086475
55.0	5.086481
56.0	5.086486
57.0	5.08649
58.0	5.086493
59.0	5.086496
60.0	5.086498
61.0	5.086499
62.0	5.086501
63.0	5.086502
64.0	5.086503
65.0	5.086503
66.0	5.086504
67.0	5.086504
68.0	5.086505
69.0	5.086505
70.0	5.086505
71.0	5.086505
72.0	5.086506
73.0	5.086506
74.0	5.086506
75.0	5.086506
76.0	5.086506
77.0	5.086506
78.0	5.086506
79.0	5.086506
80.0	5.086506
81.0	5.086506
82.0	5.086506
83.0	5.086506
84.0	5.086506
85.0	5.086506
86.0	5.086506
87.0	5.086506
88.0	5.086506
89.0	5.086506
90.0	5.086506
91.0	5.086506
92.0	5.086506
93.0	5.086506
94.0	5.086506
95.0	5.086506
96.0	5.086506
97.0	5.086506
98.0	5.086506
99.0	5.086506
100.0	5.086506