## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[BAF170_1.2x36mers.hg38+mm10.unique.nochrM.bam] OUTPUT=BAF170_1.2x36mers.hg38+mm10.unique.nochrM.dedup.bam METRICS_FILE=BAF170_1.2x36mers.hg38+mm10.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Thu May 27 19:43:32 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	1539381	0	0	198050	23141	0.128656	6056163

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.013406
2.0	1.799351
3.0	2.40889
4.0	2.881618
5.0	3.248241
6.0	3.532576
7.0	3.753091
8.0	3.924111
9.0	4.056746
10.0	4.15961
11.0	4.239387
12.0	4.301257
13.0	4.349241
14.0	4.386455
15.0	4.415316
16.0	4.437699
17.0	4.455058
18.0	4.468521
19.0	4.478962
20.0	4.48706
21.0	4.49334
22.0	4.498211
23.0	4.501988
24.0	4.504918
25.0	4.50719
26.0	4.508952
27.0	4.510318
28.0	4.511378
29.0	4.5122
30.0	4.512837
31.0	4.513332
32.0	4.513715
33.0	4.514012
34.0	4.514243
35.0	4.514422
36.0	4.514561
37.0	4.514668
38.0	4.514752
39.0	4.514816
40.0	4.514867
41.0	4.514905
42.0	4.514936
43.0	4.514959
44.0	4.514977
45.0	4.514991
46.0	4.515002
47.0	4.515011
48.0	4.515017
49.0	4.515022
50.0	4.515026
51.0	4.515029
52.0	4.515032
53.0	4.515034
54.0	4.515035
55.0	4.515036
56.0	4.515037
57.0	4.515038
58.0	4.515038
59.0	4.515039
60.0	4.515039
61.0	4.515039
62.0	4.515039
63.0	4.515039
64.0	4.51504
65.0	4.51504
66.0	4.51504
67.0	4.51504
68.0	4.51504
69.0	4.51504
70.0	4.51504
71.0	4.51504
72.0	4.51504
73.0	4.51504
74.0	4.51504
75.0	4.51504
76.0	4.51504
77.0	4.51504
78.0	4.51504
79.0	4.51504
80.0	4.51504
81.0	4.51504
82.0	4.51504
83.0	4.51504
84.0	4.51504
85.0	4.51504
86.0	4.51504
87.0	4.51504
88.0	4.51504
89.0	4.51504
90.0	4.51504
91.0	4.51504
92.0	4.51504
93.0	4.51504
94.0	4.51504
95.0	4.51504
96.0	4.51504
97.0	4.51504
98.0	4.51504
99.0	4.51504
100.0	4.51504