## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[SL29.2x36mers.hg38-male.unique.nochrM.bam] OUTPUT=SL29.2x36mers.hg38-male.unique.nochrM.dedup.bam METRICS_FILE=SL29.2x36mers.hg38-male.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Apr 14 01:39:01 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	3259570	0	0	79848	32029	0.024496	107842833

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.009774
2.0	1.989485
3.0	2.940026
4.0	3.862268
5.0	4.757051
6.0	5.625194
7.0	6.467489
8.0	7.284707
9.0	8.077594
10.0	8.846875
11.0	9.593252
12.0	10.317406
13.0	11.020001
14.0	11.701677
15.0	12.363058
16.0	13.004747
17.0	13.627332
18.0	14.23138
19.0	14.817444
20.0	15.386059
21.0	15.937745
22.0	16.473005
23.0	16.992329
24.0	17.496191
25.0	17.985052
26.0	18.459358
27.0	18.919542
28.0	19.366026
29.0	19.799216
30.0	20.219509
31.0	20.627288
32.0	21.022927
33.0	21.406786
34.0	21.779217
35.0	22.14056
36.0	22.491144
37.0	22.83129
38.0	23.161309
39.0	23.481502
40.0	23.792162
41.0	24.093573
42.0	24.38601
43.0	24.669741
44.0	24.945024
45.0	25.212111
46.0	25.471245
47.0	25.722665
48.0	25.966599
49.0	26.203271
50.0	26.432896
51.0	26.655684
52.0	26.87184
53.0	27.08156
54.0	27.285035
55.0	27.482453
56.0	27.673993
57.0	27.859831
58.0	28.040135
59.0	28.215071
60.0	28.384799
61.0	28.549474
62.0	28.709245
63.0	28.86426
64.0	29.01466
65.0	29.160581
66.0	29.302158
67.0	29.43952
68.0	29.572793
69.0	29.702097
70.0	29.827552
71.0	29.949271
72.0	30.067367
73.0	30.181946
74.0	30.293114
75.0	30.400973
76.0	30.50562
77.0	30.607151
78.0	30.70566
79.0	30.801235
80.0	30.893965
81.0	30.983934
82.0	31.071225
83.0	31.155917
84.0	31.238087
85.0	31.31781
86.0	31.39516
87.0	31.470207
88.0	31.54302
89.0	31.613665
90.0	31.682207
91.0	31.748708
92.0	31.813228
93.0	31.875828
94.0	31.936565
95.0	31.995493
96.0	32.052666
97.0	32.108137
98.0	32.161957
99.0	32.214174
100.0	32.264837