## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[SL2.2x36mers.hg38-male.unique.nochrM.bam] OUTPUT=SL2.2x36mers.hg38-male.unique.nochrM.dedup.bam METRICS_FILE=SL2.2x36mers.hg38-male.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Apr 14 01:38:53 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	10373514	0	0	497758	113776	0.047984	133624930

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.010665
2.0	1.945838
3.0	2.811159
4.0	3.611845
5.0	4.352724
6.0	5.038263
7.0	5.672596
8.0	6.259548
9.0	6.802657
10.0	7.305199
11.0	7.770204
12.0	8.200476
13.0	8.598608
14.0	8.967002
15.0	9.307879
16.0	9.623294
17.0	9.91515
18.0	10.185205
19.0	10.435088
20.0	10.666307
21.0	10.880255
22.0	11.078222
23.0	11.261402
24.0	11.430899
25.0	11.587736
26.0	11.732858
27.0	11.86714
28.0	11.991392
29.0	12.106363
30.0	12.212746
31.0	12.311183
32.0	12.402267
33.0	12.486548
34.0	12.564533
35.0	12.636694
36.0	12.703464
37.0	12.765247
38.0	12.822415
39.0	12.875313
40.0	12.924259
41.0	12.96955
42.0	13.011458
43.0	13.050235
44.0	13.086116
45.0	13.119317
46.0	13.150038
47.0	13.178464
48.0	13.204767
49.0	13.229105
50.0	13.251625
51.0	13.272463
52.0	13.291745
53.0	13.309586
54.0	13.326095
55.0	13.341371
56.0	13.355505
57.0	13.368584
58.0	13.380686
59.0	13.391884
60.0	13.402246
61.0	13.411833
62.0	13.420705
63.0	13.428914
64.0	13.436509
65.0	13.443537
66.0	13.450041
67.0	13.456058
68.0	13.461626
69.0	13.466779
70.0	13.471546
71.0	13.475957
72.0	13.480039
73.0	13.483816
74.0	13.48731
75.0	13.490544
76.0	13.493536
77.0	13.496305
78.0	13.498867
79.0	13.501237
80.0	13.503431
81.0	13.50546
82.0	13.507338
83.0	13.509076
84.0	13.510684
85.0	13.512172
86.0	13.513548
87.0	13.514822
88.0	13.516001
89.0	13.517092
90.0	13.518101
91.0	13.519035
92.0	13.519899
93.0	13.520698
94.0	13.521438
95.0	13.522123
96.0	13.522756
97.0	13.523342
98.0	13.523884
99.0	13.524386
100.0	13.524851