## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[SL16.2x36mers.hg38-male.unique.nochrM.bam] OUTPUT=SL16.2x36mers.hg38-male.unique.nochrM.dedup.bam METRICS_FILE=SL16.2x36mers.hg38-male.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Apr 14 01:38:53 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	10147261	0	0	531712	119217	0.0524	118528291

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.011387
2.0	1.939791
3.0	2.792021
4.0	3.574328
5.0	4.292447
6.0	4.951646
7.0	5.556759
8.0	6.112224
9.0	6.622113
10.0	7.090167
11.0	7.519818
12.0	7.914217
13.0	8.276256
14.0	8.60859
15.0	8.913657
16.0	9.193694
17.0	9.450754
18.0	9.686723
19.0	9.903331
20.0	10.102167
21.0	10.284689
22.0	10.452235
23.0	10.606034
24.0	10.747214
25.0	10.876811
26.0	10.995774
27.0	11.104977
28.0	11.20522
29.0	11.297238
30.0	11.381706
31.0	11.459244
32.0	11.53042
33.0	11.595756
34.0	11.655731
35.0	11.710785
36.0	11.761323
37.0	11.807713
38.0	11.850298
39.0	11.889389
40.0	11.925272
41.0	11.958211
42.0	11.988447
43.0	12.016203
44.0	12.041681
45.0	12.065069
46.0	12.086538
47.0	12.106246
48.0	12.124336
49.0	12.140942
50.0	12.156186
51.0	12.170179
52.0	12.183024
53.0	12.194815
54.0	12.205638
55.0	12.215574
56.0	12.224694
57.0	12.233066
58.0	12.240751
59.0	12.247806
60.0	12.254281
61.0	12.260226
62.0	12.265683
63.0	12.270691
64.0	12.275289
65.0	12.27951
66.0	12.283385
67.0	12.286941
68.0	12.290206
69.0	12.293203
70.0	12.295954
71.0	12.298479
72.0	12.300797
73.0	12.302925
74.0	12.304878
75.0	12.306671
76.0	12.308317
77.0	12.309828
78.0	12.311215
79.0	12.312488
80.0	12.313657
81.0	12.314729
82.0	12.315714
83.0	12.316618
84.0	12.317448
85.0	12.31821
86.0	12.318909
87.0	12.319551
88.0	12.32014
89.0	12.320681
90.0	12.321177
91.0	12.321633
92.0	12.322051
93.0	12.322435
94.0	12.322788
95.0	12.323111
96.0	12.323408
97.0	12.323681
98.0	12.323931
99.0	12.324161
100.0	12.324372