## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[EMR_009-ACBI1_1_2000_2.2x36mers.hg38-male.unique.nochrM.bam] OUTPUT=EMR_009-ACBI1_1_2000_2.2x36mers.hg38-male.unique.nochrM.dedup.bam METRICS_FILE=EMR_009-ACBI1_1_2000_2.2x36mers.hg38-male.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Mar 02 03:13:49 PST 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	5170324	0	0	185818	52655	0.035939	96626747

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.010016
2.0	1.967408
3.0	2.874919
4.0	3.735146
5.0	4.550555
6.0	5.323478
7.0	6.056131
8.0	6.750612
9.0	7.408909
10.0	8.032907
11.0	8.624394
12.0	9.185063
13.0	9.716521
14.0	10.220288
15.0	10.697808
16.0	11.150449
17.0	11.579506
18.0	11.986209
19.0	12.371721
20.0	12.737148
21.0	13.083535
22.0	13.411875
23.0	13.723108
24.0	14.018125
25.0	14.297771
26.0	14.562847
27.0	14.814112
28.0	15.052285
29.0	15.278049
30.0	15.492051
31.0	15.694903
32.0	15.887186
33.0	16.06945
34.0	16.242218
35.0	16.405985
36.0	16.561219
37.0	16.708365
38.0	16.847845
39.0	16.980057
40.0	17.105381
41.0	17.224175
42.0	17.33678
43.0	17.443518
44.0	17.544695
45.0	17.6406
46.0	17.731508
47.0	17.81768
48.0	17.899362
49.0	17.976789
50.0	18.050181
51.0	18.11975
52.0	18.185693
53.0	18.248201
54.0	18.307453
55.0	18.363617
56.0	18.416855
57.0	18.467319
58.0	18.515154
59.0	18.560496
60.0	18.603476
61.0	18.644217
62.0	18.682835
63.0	18.719441
64.0	18.75414
65.0	18.787031
66.0	18.818208
67.0	18.847761
68.0	18.875774
69.0	18.902327
70.0	18.927497
71.0	18.951356
72.0	18.973972
73.0	18.995409
74.0	19.015729
75.0	19.034991
76.0	19.053249
77.0	19.070556
78.0	19.086961
79.0	19.102511
80.0	19.117251
81.0	19.131223
82.0	19.144468
83.0	19.157022
84.0	19.168922
85.0	19.180202
86.0	19.190894
87.0	19.201029
88.0	19.210636
89.0	19.219743
90.0	19.228375
91.0	19.236557
92.0	19.244314
93.0	19.251665
94.0	19.258634
95.0	19.26524
96.0	19.271502
97.0	19.277437
98.0	19.283063
99.0	19.288396
100.0	19.293452