## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[EMR_008-ACBI1_1_2000_1.2x36mers.hg38-male.unique.nochrM.bam] OUTPUT=EMR_008-ACBI1_1_2000_1.2x36mers.hg38-male.unique.nochrM.dedup.bam METRICS_FILE=EMR_008-ACBI1_1_2000_1.2x36mers.hg38-male.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Mar 02 03:13:48 PST 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	4490997	0	0	156275	55356	0.034797	95994503

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.01219
2.0	1.978117
3.0	2.899894
4.0	3.779541
5.0	4.618982
6.0	5.420055
7.0	6.184514
8.0	6.914032
9.0	7.610207
10.0	8.274562
11.0	8.908552
12.0	9.513564
13.0	10.090924
14.0	10.641894
15.0	11.167682
16.0	11.669437
17.0	12.148259
18.0	12.605196
19.0	13.041249
20.0	13.45737
21.0	13.854472
22.0	14.233425
23.0	14.595056
24.0	14.940159
25.0	15.269488
26.0	15.583765
27.0	15.883678
28.0	16.169882
29.0	16.443005
30.0	16.703645
31.0	16.952371
32.0	17.18973
33.0	17.416239
34.0	17.632396
35.0	17.838673
36.0	18.035521
37.0	18.223373
38.0	18.402638
39.0	18.57371
40.0	18.736963
41.0	18.892754
42.0	19.041425
43.0	19.1833
44.0	19.31869
45.0	19.447893
46.0	19.57119
47.0	19.688851
48.0	19.801135
49.0	19.908287
50.0	20.010541
51.0	20.108121
52.0	20.201242
53.0	20.290106
54.0	20.374908
55.0	20.455835
56.0	20.533062
57.0	20.60676
58.0	20.67709
59.0	20.744205
60.0	20.808252
61.0	20.869372
62.0	20.927698
63.0	20.983359
64.0	21.036475
65.0	21.087164
66.0	21.135536
67.0	21.181696
68.0	21.225748
69.0	21.267785
70.0	21.307902
71.0	21.346184
72.0	21.382717
73.0	21.41758
74.0	21.45085
75.0	21.482599
76.0	21.512897
77.0	21.54181
78.0	21.569402
79.0	21.595732
80.0	21.620859
81.0	21.644838
82.0	21.667721
83.0	21.689557
84.0	21.710396
85.0	21.730282
86.0	21.749259
87.0	21.767369
88.0	21.784651
89.0	21.801143
90.0	21.816882
91.0	21.831901
92.0	21.846234
93.0	21.859911
94.0	21.872963
95.0	21.885419
96.0	21.897306
97.0	21.908649
98.0	21.919474
99.0	21.929804
100.0	21.939661