## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[EMR_006-ACBI1_1_1000_1.2x36mers.hg38-male.unique.nochrM.bam] OUTPUT=EMR_006-ACBI1_1_1000_1.2x36mers.hg38-male.unique.nochrM.dedup.bam METRICS_FILE=EMR_006-ACBI1_1_1000_1.2x36mers.hg38-male.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Mar 02 03:13:49 PST 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	8195523	0	0	341837	100392	0.04171	132994148

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.012023
2.0	1.963565
3.0	2.85824
4.0	3.699447
5.0	4.490381
6.0	5.234046
7.0	5.933268
8.0	6.590702
9.0	7.208846
10.0	7.790048
11.0	8.336516
12.0	8.850325
13.0	9.333427
14.0	9.787658
15.0	10.214743
16.0	10.616304
17.0	10.993866
18.0	11.348864
19.0	11.682647
20.0	11.996482
21.0	12.291561
22.0	12.569005
23.0	12.829868
24.0	13.075142
25.0	13.305757
26.0	13.52259
27.0	13.726464
28.0	13.918155
29.0	14.098389
30.0	14.267852
31.0	14.427187
32.0	14.577
33.0	14.71786
34.0	14.850302
35.0	14.974828
36.0	15.091913
37.0	15.202
38.0	15.305508
39.0	15.40283
40.0	15.494336
41.0	15.580373
42.0	15.661268
43.0	15.737329
44.0	15.808844
45.0	15.876086
46.0	15.939308
47.0	15.998753
48.0	16.054644
49.0	16.107196
50.0	16.156607
51.0	16.203065
52.0	16.246746
53.0	16.287817
54.0	16.326434
55.0	16.362742
56.0	16.396881
57.0	16.42898
58.0	16.45916
59.0	16.487536
60.0	16.514217
61.0	16.539303
62.0	16.56289
63.0	16.585067
64.0	16.605919
65.0	16.625525
66.0	16.643959
67.0	16.661291
68.0	16.677588
69.0	16.692911
70.0	16.707317
71.0	16.720863
72.0	16.7336
73.0	16.745575
74.0	16.756834
75.0	16.767421
76.0	16.777375
77.0	16.786734
78.0	16.795534
79.0	16.803808
80.0	16.811587
81.0	16.818901
82.0	16.825779
83.0	16.832245
84.0	16.838325
85.0	16.844042
86.0	16.849416
87.0	16.85447
88.0	16.859222
89.0	16.863689
90.0	16.86789
91.0	16.87184
92.0	16.875553
93.0	16.879045
94.0	16.882328
95.0	16.885415
96.0	16.888317
97.0	16.891046
98.0	16.893612
99.0	16.896024
100.0	16.898292