## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[Myotis_thysanodes_Fringed_MyotisID_MTHY_P3_Sample2430.2x36mers-trimmed.a.bam] OUTPUT=Myotis_thysanodes_Fringed_MyotisID_MTHY_P3_Sample2430.2x36mers-trimmed.a.dedup.bam METRICS_FILE=Myotis_thysanodes_Fringed_MyotisID_MTHY_P3_Sample2430.2x36mers-trimmed.a.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Thu Jan 21 14:41:41 PST 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	14481296	0	0	7647784	3150076	0.528115	10173734

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.130158
2.0	1.402406
3.0	1.467988
4.0	1.483787
5.0	1.487592
6.0	1.488509
7.0	1.48873
8.0	1.488783
9.0	1.488796
10.0	1.488799
11.0	1.4888
12.0	1.4888
13.0	1.4888
14.0	1.4888
15.0	1.4888
16.0	1.4888
17.0	1.4888
18.0	1.4888
19.0	1.4888
20.0	1.4888
21.0	1.4888
22.0	1.4888
23.0	1.4888
24.0	1.4888
25.0	1.4888
26.0	1.4888
27.0	1.4888
28.0	1.4888
29.0	1.4888
30.0	1.4888
31.0	1.4888
32.0	1.4888
33.0	1.4888
34.0	1.4888
35.0	1.4888
36.0	1.4888
37.0	1.4888
38.0	1.4888
39.0	1.4888
40.0	1.4888
41.0	1.4888
42.0	1.4888
43.0	1.4888
44.0	1.4888
45.0	1.4888
46.0	1.4888
47.0	1.4888
48.0	1.4888
49.0	1.4888
50.0	1.4888
51.0	1.4888
52.0	1.4888
53.0	1.4888
54.0	1.4888
55.0	1.4888
56.0	1.4888
57.0	1.4888
58.0	1.4888
59.0	1.4888
60.0	1.4888
61.0	1.4888
62.0	1.4888
63.0	1.4888
64.0	1.4888
65.0	1.4888
66.0	1.4888
67.0	1.4888
68.0	1.4888
69.0	1.4888
70.0	1.4888
71.0	1.4888
72.0	1.4888
73.0	1.4888
74.0	1.4888
75.0	1.4888
76.0	1.4888
77.0	1.4888
78.0	1.4888
79.0	1.4888
80.0	1.4888
81.0	1.4888
82.0	1.4888
83.0	1.4888
84.0	1.4888
85.0	1.4888
86.0	1.4888
87.0	1.4888
88.0	1.4888
89.0	1.4888
90.0	1.4888
91.0	1.4888
92.0	1.4888
93.0	1.4888
94.0	1.4888
95.0	1.4888
96.0	1.4888
97.0	1.4888
98.0	1.4888
99.0	1.4888
100.0	1.4888