## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[S7KO2-SIRT7.2x25mers.hg38.unique.bam] OUTPUT=S7KO2-SIRT7.2x25mers.hg38.unique.dedup.bam METRICS_FILE=S7KO2-SIRT7.2x25mers.hg38.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Feb 01 14:20:03 PST 2023

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	1414317	12136544	0	239023	143281	0.169002	8007683

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.103093
2.0	2.027593
3.0	2.802415
4.0	3.451791
5.0	3.996033
6.0	4.452161
7.0	4.834441
8.0	5.154829
9.0	5.423345
10.0	5.648389
11.0	5.836997
12.0	5.99507
13.0	6.12755
14.0	6.238581
15.0	6.331636
16.0	6.409626
17.0	6.474989
18.0	6.529769
19.0	6.57568
20.0	6.614159
21.0	6.646407
22.0	6.673435
23.0	6.696086
24.0	6.715071
25.0	6.730981
26.0	6.744316
27.0	6.755492
28.0	6.764858
29.0	6.772708
30.0	6.779287
31.0	6.784801
32.0	6.789423
33.0	6.793296
34.0	6.796542
35.0	6.799262
36.0	6.801542
37.0	6.803453
38.0	6.805054
39.0	6.806397
40.0	6.807521
41.0	6.808464
42.0	6.809254
43.0	6.809917
44.0	6.810472
45.0	6.810937
46.0	6.811327
47.0	6.811653
48.0	6.811927
49.0	6.812157
50.0	6.812349
51.0	6.81251
52.0	6.812645
53.0	6.812758
54.0	6.812853
55.0	6.812933
56.0	6.813
57.0	6.813055
58.0	6.813102
59.0	6.813141
60.0	6.813174
61.0	6.813202
62.0	6.813225
63.0	6.813244
64.0	6.813261
65.0	6.813274
66.0	6.813286
67.0	6.813295
68.0	6.813303
69.0	6.81331
70.0	6.813315
71.0	6.81332
72.0	6.813324
73.0	6.813327
74.0	6.81333
75.0	6.813333
76.0	6.813334
77.0	6.813336
78.0	6.813337
79.0	6.813339
80.0	6.81334
81.0	6.81334
82.0	6.813341
83.0	6.813342
84.0	6.813342
85.0	6.813343
86.0	6.813343
87.0	6.813343
88.0	6.813343
89.0	6.813344
90.0	6.813344
91.0	6.813344
92.0	6.813344
93.0	6.813344
94.0	6.813344
95.0	6.813344
96.0	6.813344
97.0	6.813344
98.0	6.813344
99.0	6.813344
100.0	6.813344

