## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LUC1-H3.2x25mers.hg38.unique.bam] OUTPUT=LUC1-H3.2x25mers.hg38.unique.dedup.bam METRICS_FILE=LUC1-H3.2x25mers.hg38.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Feb 01 14:19:31 PST 2023

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	1832231	8440522	0	372085	217315	0.203078	7877882

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.119589
2.0	2.006848
3.0	2.709989
4.0	3.26722
5.0	3.708818
6.0	4.058779
7.0	4.336118
8.0	4.555906
9.0	4.730085
10.0	4.868119
11.0	4.97751
12.0	5.064201
13.0	5.132902
14.0	5.187347
15.0	5.230493
16.0	5.264687
17.0	5.291784
18.0	5.313259
19.0	5.330277
20.0	5.343764
21.0	5.354452
22.0	5.362923
23.0	5.369635
24.0	5.374955
25.0	5.37917
26.0	5.382511
27.0	5.385159
28.0	5.387257
29.0	5.38892
30.0	5.390238
31.0	5.391282
32.0	5.39211
33.0	5.392765
34.0	5.393285
35.0	5.393697
36.0	5.394023
37.0	5.394282
38.0	5.394487
39.0	5.39465
40.0	5.394778
41.0	5.39488
42.0	5.394961
43.0	5.395025
44.0	5.395076
45.0	5.395116
46.0	5.395148
47.0	5.395174
48.0	5.395194
49.0	5.395209
50.0	5.395222
51.0	5.395232
52.0	5.39524
53.0	5.395246
54.0	5.395251
55.0	5.395255
56.0	5.395258
57.0	5.395261
58.0	5.395263
59.0	5.395264
60.0	5.395265
61.0	5.395266
62.0	5.395267
63.0	5.395268
64.0	5.395268
65.0	5.395269
66.0	5.395269
67.0	5.395269
68.0	5.395269
69.0	5.395269
70.0	5.39527
71.0	5.39527
72.0	5.39527
73.0	5.39527
74.0	5.39527
75.0	5.39527
76.0	5.39527
77.0	5.39527
78.0	5.39527
79.0	5.39527
80.0	5.39527
81.0	5.39527
82.0	5.39527
83.0	5.39527
84.0	5.39527
85.0	5.39527
86.0	5.39527
87.0	5.39527
88.0	5.39527
89.0	5.39527
90.0	5.39527
91.0	5.39527
92.0	5.39527
93.0	5.39527
94.0	5.39527
95.0	5.39527
96.0	5.39527
97.0	5.39527
98.0	5.39527
99.0	5.39527
100.0	5.39527

