@include "rna/_sc_rna_aggregator_stages.mro"

call SETUP_SAMPLES(
    sample_defs = [
        {
            "library_id": "cellranger-Aiptasia-apo_rep1",
            "molecule_h5": "/oak/stanford/groups/akundaje/marinovg/various/2025-02-27-Tingting-scRNA-seq/cellranger-Aiptasia-apo_rep1/outs/molecule_info.h5",
        },
        {
            "library_id": "cellranger-Aiptasia-pilot_Apo_Sym",
            "molecule_h5": "/oak/stanford/groups/akundaje/marinovg/various/2025-02-27-Tingting-scRNA-seq/cellranger-Aiptasia-pilot_Apo_Sym/outs/molecule_info.h5",
        },
        {
            "library_id": "cellranger-Aiptasia-superloading_Sym",
            "molecule_h5": "/oak/stanford/groups/akundaje/marinovg/various/2025-02-27-Tingting-scRNA-seq/cellranger-Aiptasia-superloading_Sym/outs/molecule_info.h5",
        },
        {
            "library_id": "cellranger-Aiptasia-sym_rep1",
            "molecule_h5": "/oak/stanford/groups/akundaje/marinovg/various/2025-02-27-Tingting-scRNA-seq/cellranger-Aiptasia-sym_rep1/outs/molecule_info.h5",
        },
        {
            "library_id": "cellranger-Aiptasia-sym_reprep1",
            "molecule_h5": "/oak/stanford/groups/akundaje/marinovg/various/2025-02-27-Tingting-scRNA-seq/cellranger-Aiptasia-sym_reprep1/outs/molecule_info.h5",
        },
    ],
)
