## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[Lung-0day-rep2-ATAC-GSM7164793.2x36mers.noMT.unique.bam] OUTPUT=Lung-0day-rep2-ATAC-GSM7164793.2x36mers.noMT.unique.dedup.bam METRICS_FILE=Lung-0day-rep2-ATAC-GSM7164793.2x36mers.noMT.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Jul 09 18:57:56 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	126389500	0	0	24578088	0	0.194463	281312104

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.638084
3.0	2.045235
4.0	2.305031
5.0	2.470803
6.0	2.576579
7.0	2.644073
8.0	2.68714
9.0	2.714621
10.0	2.732155
11.0	2.743344
12.0	2.750483
13.0	2.755039
14.0	2.757946
15.0	2.7598
16.0	2.760984
17.0	2.761739
18.0	2.762221
19.0	2.762528
20.0	2.762725
21.0	2.76285
22.0	2.76293
23.0	2.762981
24.0	2.763013
25.0	2.763034
26.0	2.763047
27.0	2.763056
28.0	2.763061
29.0	2.763064
30.0	2.763067
31.0	2.763068
32.0	2.763069
33.0	2.763069
34.0	2.76307
35.0	2.76307
36.0	2.76307
37.0	2.76307
38.0	2.76307
39.0	2.76307
40.0	2.76307
41.0	2.76307
42.0	2.76307
43.0	2.76307
44.0	2.76307
45.0	2.76307
46.0	2.76307
47.0	2.76307
48.0	2.76307
49.0	2.76307
50.0	2.76307
51.0	2.76307
52.0	2.76307
53.0	2.76307
54.0	2.76307
55.0	2.76307
56.0	2.76307
57.0	2.76307
58.0	2.76307
59.0	2.76307
60.0	2.76307
61.0	2.76307
62.0	2.76307
63.0	2.76307
64.0	2.76307
65.0	2.76307
66.0	2.76307
67.0	2.76307
68.0	2.76307
69.0	2.76307
70.0	2.76307
71.0	2.76307
72.0	2.76307
73.0	2.76307
74.0	2.76307
75.0	2.76307
76.0	2.76307
77.0	2.76307
78.0	2.76307
79.0	2.76307
80.0	2.76307
81.0	2.76307
82.0	2.76307
83.0	2.76307
84.0	2.76307
85.0	2.76307
86.0	2.76307
87.0	2.76307
88.0	2.76307
89.0	2.76307
90.0	2.76307
91.0	2.76307
92.0	2.76307
93.0	2.76307
94.0	2.76307
95.0	2.76307
96.0	2.76307
97.0	2.76307
98.0	2.76307
99.0	2.76307
100.0	2.76307