## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LW_2W_1_Muscle_ATAC-GSM4256395.2x36mers.noMT.unique.bam] OUTPUT=LW_2W_1_Muscle_ATAC-GSM4256395.2x36mers.noMT.unique.dedup.bam METRICS_FILE=LW_2W_1_Muscle_ATAC-GSM4256395.2x36mers.noMT.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Jul 09 18:58:55 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	106908672	0	0	27667417	0	0.258795	169120140

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.53145
3.0	1.813889
4.0	1.963991
5.0	2.043763
6.0	2.086158
7.0	2.108688
8.0	2.120662
9.0	2.127026
10.0	2.130408
11.0	2.132205
12.0	2.13316
13.0	2.133668
14.0	2.133938
15.0	2.134081
16.0	2.134157
17.0	2.134198
18.0	2.134219
19.0	2.134231
20.0	2.134237
21.0	2.13424
22.0	2.134242
23.0	2.134243
24.0	2.134243
25.0	2.134243
26.0	2.134243
27.0	2.134244
28.0	2.134244
29.0	2.134244
30.0	2.134244
31.0	2.134244
32.0	2.134244
33.0	2.134244
34.0	2.134244
35.0	2.134244
36.0	2.134244
37.0	2.134244
38.0	2.134244
39.0	2.134244
40.0	2.134244
41.0	2.134244
42.0	2.134244
43.0	2.134244
44.0	2.134244
45.0	2.134244
46.0	2.134244
47.0	2.134244
48.0	2.134244
49.0	2.134244
50.0	2.134244
51.0	2.134244
52.0	2.134244
53.0	2.134244
54.0	2.134244
55.0	2.134244
56.0	2.134244
57.0	2.134244
58.0	2.134244
59.0	2.134244
60.0	2.134244
61.0	2.134244
62.0	2.134244
63.0	2.134244
64.0	2.134244
65.0	2.134244
66.0	2.134244
67.0	2.134244
68.0	2.134244
69.0	2.134244
70.0	2.134244
71.0	2.134244
72.0	2.134244
73.0	2.134244
74.0	2.134244
75.0	2.134244
76.0	2.134244
77.0	2.134244
78.0	2.134244
79.0	2.134244
80.0	2.134244
81.0	2.134244
82.0	2.134244
83.0	2.134244
84.0	2.134244
85.0	2.134244
86.0	2.134244
87.0	2.134244
88.0	2.134244
89.0	2.134244
90.0	2.134244
91.0	2.134244
92.0	2.134244
93.0	2.134244
94.0	2.134244
95.0	2.134244
96.0	2.134244
97.0	2.134244
98.0	2.134244
99.0	2.134244
100.0	2.134244