## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[ES_2W_2_Muscle_ATAC-GSM4256389.2x36mers.noMT.unique.bam] OUTPUT=ES_2W_2_Muscle_ATAC-GSM4256389.2x36mers.noMT.unique.dedup.bam METRICS_FILE=ES_2W_2_Muscle_ATAC-GSM4256389.2x36mers.noMT.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Jul 09 18:58:56 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	51997795	0	0	15640352	0	0.300789	68058753

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.465793
3.0	1.682757
4.0	1.783817
5.0	1.83089
6.0	1.852816
7.0	1.863029
8.0	1.867787
9.0	1.870002
10.0	1.871035
11.0	1.871515
12.0	1.871739
13.0	1.871844
14.0	1.871892
15.0	1.871915
16.0	1.871925
17.0	1.87193
18.0	1.871933
19.0	1.871934
20.0	1.871934
21.0	1.871934
22.0	1.871934
23.0	1.871934
24.0	1.871935
25.0	1.871935
26.0	1.871935
27.0	1.871935
28.0	1.871935
29.0	1.871935
30.0	1.871935
31.0	1.871935
32.0	1.871935
33.0	1.871935
34.0	1.871935
35.0	1.871935
36.0	1.871935
37.0	1.871935
38.0	1.871935
39.0	1.871935
40.0	1.871935
41.0	1.871935
42.0	1.871935
43.0	1.871935
44.0	1.871935
45.0	1.871935
46.0	1.871935
47.0	1.871935
48.0	1.871935
49.0	1.871935
50.0	1.871935
51.0	1.871935
52.0	1.871935
53.0	1.871935
54.0	1.871935
55.0	1.871935
56.0	1.871935
57.0	1.871935
58.0	1.871935
59.0	1.871935
60.0	1.871935
61.0	1.871935
62.0	1.871935
63.0	1.871935
64.0	1.871935
65.0	1.871935
66.0	1.871935
67.0	1.871935
68.0	1.871935
69.0	1.871935
70.0	1.871935
71.0	1.871935
72.0	1.871935
73.0	1.871935
74.0	1.871935
75.0	1.871935
76.0	1.871935
77.0	1.871935
78.0	1.871935
79.0	1.871935
80.0	1.871935
81.0	1.871935
82.0	1.871935
83.0	1.871935
84.0	1.871935
85.0	1.871935
86.0	1.871935
87.0	1.871935
88.0	1.871935
89.0	1.871935
90.0	1.871935
91.0	1.871935
92.0	1.871935
93.0	1.871935
94.0	1.871935
95.0	1.871935
96.0	1.871935
97.0	1.871935
98.0	1.871935
99.0	1.871935
100.0	1.871935