## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[Duroc_2W_1_Fat_ATAC-GSM4256374.2x36mers.noMT.unique.bam] OUTPUT=Duroc_2W_1_Fat_ATAC-GSM4256374.2x36mers.noMT.unique.dedup.bam METRICS_FILE=Duroc_2W_1_Fat_ATAC-GSM4256374.2x36mers.noMT.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Jul 09 18:57:56 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	89518094	0	0	18599436	0	0.207773	184416971

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.615444
3.0	1.994215
4.0	2.227328
5.0	2.370795
6.0	2.459092
7.0	2.513433
8.0	2.546877
9.0	2.56746
10.0	2.580128
11.0	2.587924
12.0	2.592722
13.0	2.595675
14.0	2.597493
15.0	2.598611
16.0	2.5993
17.0	2.599723
18.0	2.599984
19.0	2.600144
20.0	2.600243
21.0	2.600304
22.0	2.600341
23.0	2.600364
24.0	2.600379
25.0	2.600387
26.0	2.600393
27.0	2.600396
28.0	2.600398
29.0	2.600399
30.0	2.6004
31.0	2.600401
32.0	2.600401
33.0	2.600401
34.0	2.600401
35.0	2.600401
36.0	2.600401
37.0	2.600401
38.0	2.600401
39.0	2.600401
40.0	2.600401
41.0	2.600401
42.0	2.600401
43.0	2.600401
44.0	2.600401
45.0	2.600401
46.0	2.600401
47.0	2.600401
48.0	2.600401
49.0	2.600401
50.0	2.600401
51.0	2.600401
52.0	2.600401
53.0	2.600401
54.0	2.600401
55.0	2.600401
56.0	2.600401
57.0	2.600401
58.0	2.600401
59.0	2.600401
60.0	2.600401
61.0	2.600401
62.0	2.600401
63.0	2.600401
64.0	2.600401
65.0	2.600401
66.0	2.600401
67.0	2.600401
68.0	2.600401
69.0	2.600401
70.0	2.600401
71.0	2.600401
72.0	2.600401
73.0	2.600401
74.0	2.600401
75.0	2.600401
76.0	2.600401
77.0	2.600401
78.0	2.600401
79.0	2.600401
80.0	2.600401
81.0	2.600401
82.0	2.600401
83.0	2.600401
84.0	2.600401
85.0	2.600401
86.0	2.600401
87.0	2.600401
88.0	2.600401
89.0	2.600401
90.0	2.600401
91.0	2.600401
92.0	2.600401
93.0	2.600401
94.0	2.600401
95.0	2.600401
96.0	2.600401
97.0	2.600401
98.0	2.600401
99.0	2.600401
100.0	2.600401