## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LS70_Mu2-CRR995113.2x36mers.noMT.bwa.unique.bam] OUTPUT=LS70_Mu2-CRR995113.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LS70_Mu2-CRR995113.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:15 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	15626964	0	0	4277429	2635146	0.273721	46959450

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.171217
2.0	2.010898
3.0	2.612892
4.0	3.04448
5.0	3.353899
6.0	3.575731
7.0	3.734769
8.0	3.848788
9.0	3.930532
10.0	3.989137
11.0	4.031153
12.0	4.061275
13.0	4.082871
14.0	4.098353
15.0	4.109453
16.0	4.117411
17.0	4.123116
18.0	4.127207
19.0	4.130139
20.0	4.132241
21.0	4.133749
22.0	4.134829
23.0	4.135604
24.0	4.136159
25.0	4.136557
26.0	4.136843
27.0	4.137048
28.0	4.137194
29.0	4.1373
30.0	4.137375
31.0	4.137429
32.0	4.137468
33.0	4.137496
34.0	4.137516
35.0	4.13753
36.0	4.13754
37.0	4.137547
38.0	4.137553
39.0	4.137556
40.0	4.137559
41.0	4.137561
42.0	4.137562
43.0	4.137563
44.0	4.137564
45.0	4.137565
46.0	4.137565
47.0	4.137565
48.0	4.137566
49.0	4.137566
50.0	4.137566
51.0	4.137566
52.0	4.137566
53.0	4.137566
54.0	4.137566
55.0	4.137566
56.0	4.137566
57.0	4.137566
58.0	4.137566
59.0	4.137566
60.0	4.137566
61.0	4.137566
62.0	4.137566
63.0	4.137566
64.0	4.137566
65.0	4.137566
66.0	4.137566
67.0	4.137566
68.0	4.137566
69.0	4.137566
70.0	4.137566
71.0	4.137566
72.0	4.137566
73.0	4.137566
74.0	4.137566
75.0	4.137566
76.0	4.137566
77.0	4.137566
78.0	4.137566
79.0	4.137566
80.0	4.137566
81.0	4.137566
82.0	4.137566
83.0	4.137566
84.0	4.137566
85.0	4.137566
86.0	4.137566
87.0	4.137566
88.0	4.137566
89.0	4.137566
90.0	4.137566
91.0	4.137566
92.0	4.137566
93.0	4.137566
94.0	4.137566
95.0	4.137566
96.0	4.137566
97.0	4.137566
98.0	4.137566
99.0	4.137566
100.0	4.137566