## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LS70_Li3-CRR995111.2x36mers.noMT.bwa.unique.bam] OUTPUT=LS70_Li3-CRR995111.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LS70_Li3-CRR995111.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:49 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	21110638	0	0	6252568	4512085	0.296181	73512771

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.235015
2.0	2.16175
3.0	2.857158
4.0	3.378982
5.0	3.77055
6.0	4.064376
7.0	4.284859
8.0	4.450306
9.0	4.574455
10.0	4.667614
11.0	4.73752
12.0	4.789976
13.0	4.829338
14.0	4.858874
15.0	4.881038
16.0	4.89767
17.0	4.910149
18.0	4.919514
19.0	4.926541
20.0	4.931814
21.0	4.935771
22.0	4.93874
23.0	4.940968
24.0	4.94264
25.0	4.943895
26.0	4.944836
27.0	4.945543
28.0	4.946073
29.0	4.94647
30.0	4.946769
31.0	4.946993
32.0	4.947161
33.0	4.947287
34.0	4.947382
35.0	4.947453
36.0	4.947506
37.0	4.947546
38.0	4.947576
39.0	4.947599
40.0	4.947615
41.0	4.947628
42.0	4.947638
43.0	4.947645
44.0	4.94765
45.0	4.947654
46.0	4.947657
47.0	4.947659
48.0	4.947661
49.0	4.947662
50.0	4.947663
51.0	4.947664
52.0	4.947665
53.0	4.947665
54.0	4.947665
55.0	4.947666
56.0	4.947666
57.0	4.947666
58.0	4.947666
59.0	4.947666
60.0	4.947666
61.0	4.947666
62.0	4.947666
63.0	4.947666
64.0	4.947666
65.0	4.947666
66.0	4.947666
67.0	4.947666
68.0	4.947666
69.0	4.947666
70.0	4.947666
71.0	4.947666
72.0	4.947666
73.0	4.947666
74.0	4.947666
75.0	4.947666
76.0	4.947666
77.0	4.947666
78.0	4.947666
79.0	4.947666
80.0	4.947666
81.0	4.947666
82.0	4.947666
83.0	4.947666
84.0	4.947666
85.0	4.947666
86.0	4.947666
87.0	4.947666
88.0	4.947666
89.0	4.947666
90.0	4.947666
91.0	4.947666
92.0	4.947666
93.0	4.947666
94.0	4.947666
95.0	4.947666
96.0	4.947666
97.0	4.947666
98.0	4.947666
99.0	4.947666
100.0	4.947666