## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LS70_Br3-CRR995108.2x36mers.noMT.bwa.unique.bam] OUTPUT=LS70_Br3-CRR995108.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LS70_Br3-CRR995108.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:49 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	7542522	0	0	1697309	1213338	0.225032	39247529

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.17396
2.0	2.142665
3.0	2.942001
4.0	3.601581
5.0	4.14584
6.0	4.594941
7.0	4.96552
8.0	5.271308
9.0	5.523631
10.0	5.731838
11.0	5.903643
12.0	6.045408
13.0	6.162388
14.0	6.258915
15.0	6.338565
16.0	6.404289
17.0	6.458522
18.0	6.503272
19.0	6.540199
20.0	6.570669
21.0	6.595812
22.0	6.616559
23.0	6.633678
24.0	6.647805
25.0	6.659461
26.0	6.669079
27.0	6.677016
28.0	6.683565
29.0	6.688969
30.0	6.693429
31.0	6.697108
32.0	6.700144
33.0	6.70265
34.0	6.704717
35.0	6.706423
36.0	6.70783
37.0	6.708992
38.0	6.70995
39.0	6.710741
40.0	6.711394
41.0	6.711932
42.0	6.712377
43.0	6.712743
44.0	6.713046
45.0	6.713295
46.0	6.713501
47.0	6.713671
48.0	6.713812
49.0	6.713927
50.0	6.714023
51.0	6.714102
52.0	6.714167
53.0	6.71422
54.0	6.714265
55.0	6.714301
56.0	6.714331
57.0	6.714356
58.0	6.714377
59.0	6.714394
60.0	6.714408
61.0	6.714419
62.0	6.714429
63.0	6.714437
64.0	6.714443
65.0	6.714448
66.0	6.714453
67.0	6.714457
68.0	6.71446
69.0	6.714462
70.0	6.714464
71.0	6.714466
72.0	6.714467
73.0	6.714468
74.0	6.714469
75.0	6.71447
76.0	6.714471
77.0	6.714471
78.0	6.714472
79.0	6.714472
80.0	6.714472
81.0	6.714473
82.0	6.714473
83.0	6.714473
84.0	6.714473
85.0	6.714473
86.0	6.714473
87.0	6.714473
88.0	6.714473
89.0	6.714473
90.0	6.714474
91.0	6.714474
92.0	6.714474
93.0	6.714474
94.0	6.714474
95.0	6.714474
96.0	6.714474
97.0	6.714474
98.0	6.714474
99.0	6.714474
100.0	6.714474