## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LS70_Br1-CRR995106.2x36mers.noMT.bwa.unique.bam] OUTPUT=LS70_Br1-CRR995106.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LS70_Br1-CRR995106.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:51 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	7191459	0	0	1269663	1014989	0.176552	72823991

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.156369
2.0	2.204002
3.0	3.153125
4.0	4.012999
5.0	4.792018
6.0	5.497785
7.0	6.137186
8.0	6.716464
9.0	7.241271
10.0	7.716729
11.0	8.147479
12.0	8.537725
13.0	8.891275
14.0	9.21158
15.0	9.501766
16.0	9.764666
17.0	10.002844
18.0	10.218626
19.0	10.414118
20.0	10.591227
21.0	10.751683
22.0	10.89705
23.0	11.028748
24.0	11.148063
25.0	11.256158
26.0	11.354088
27.0	11.44281
28.0	11.52319
29.0	11.596011
30.0	11.661984
31.0	11.721754
32.0	11.775904
33.0	11.824962
34.0	11.869407
35.0	11.909672
36.0	11.946152
37.0	11.979201
38.0	12.009142
39.0	12.036268
40.0	12.060844
41.0	12.083108
42.0	12.103279
43.0	12.121553
44.0	12.138109
45.0	12.153108
46.0	12.166697
47.0	12.179008
48.0	12.190161
49.0	12.200265
50.0	12.20942
51.0	12.217713
52.0	12.225227
53.0	12.232034
54.0	12.238201
55.0	12.243788
56.0	12.24885
57.0	12.253436
58.0	12.257591
59.0	12.261355
60.0	12.264765
61.0	12.267854
62.0	12.270653
63.0	12.273188
64.0	12.275486
65.0	12.277567
66.0	12.279452
67.0	12.281161
68.0	12.282708
69.0	12.28411
70.0	12.285381
71.0	12.286531
72.0	12.287574
73.0	12.288519
74.0	12.289374
75.0	12.29015
76.0	12.290852
77.0	12.291488
78.0	12.292065
79.0	12.292587
80.0	12.29306
81.0	12.293489
82.0	12.293877
83.0	12.294229
84.0	12.294548
85.0	12.294837
86.0	12.295098
87.0	12.295335
88.0	12.29555
89.0	12.295745
90.0	12.295921
91.0	12.296081
92.0	12.296225
93.0	12.296356
94.0	12.296475
95.0	12.296583
96.0	12.29668
97.0	12.296768
98.0	12.296848
99.0	12.296921
100.0	12.296986