## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB70_Pl2-CRR995075.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB70_Pl2-CRR995075.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB70_Pl2-CRR995075.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:10 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	19923671	0	0	5317499	3703969	0.266894	76021423

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.199956
2.0	2.123262
3.0	2.833699
4.0	3.380345
5.0	3.800961
6.0	4.124604
7.0	4.373631
8.0	4.565245
9.0	4.712682
10.0	4.826128
11.0	4.913419
12.0	4.980584
13.0	5.032265
14.0	5.072031
15.0	5.102628
16.0	5.126172
17.0	5.144287
18.0	5.158226
19.0	5.168951
20.0	5.177204
21.0	5.183554
22.0	5.18844
23.0	5.192199
24.0	5.195092
25.0	5.197318
26.0	5.199031
27.0	5.200348
28.0	5.201362
29.0	5.202143
30.0	5.202743
31.0	5.203205
32.0	5.20356
33.0	5.203834
34.0	5.204044
35.0	5.204206
36.0	5.204331
37.0	5.204427
38.0	5.2045
39.0	5.204557
40.0	5.204601
41.0	5.204634
42.0	5.20466
43.0	5.20468
44.0	5.204695
45.0	5.204707
46.0	5.204716
47.0	5.204723
48.0	5.204729
49.0	5.204733
50.0	5.204736
51.0	5.204738
52.0	5.20474
53.0	5.204742
54.0	5.204743
55.0	5.204744
56.0	5.204744
57.0	5.204745
58.0	5.204745
59.0	5.204746
60.0	5.204746
61.0	5.204746
62.0	5.204746
63.0	5.204746
64.0	5.204746
65.0	5.204746
66.0	5.204746
67.0	5.204746
68.0	5.204746
69.0	5.204746
70.0	5.204746
71.0	5.204746
72.0	5.204746
73.0	5.204747
74.0	5.204747
75.0	5.204747
76.0	5.204747
77.0	5.204747
78.0	5.204747
79.0	5.204747
80.0	5.204747
81.0	5.204747
82.0	5.204747
83.0	5.204747
84.0	5.204747
85.0	5.204747
86.0	5.204747
87.0	5.204747
88.0	5.204747
89.0	5.204747
90.0	5.204747
91.0	5.204747
92.0	5.204747
93.0	5.204747
94.0	5.204747
95.0	5.204747
96.0	5.204747
97.0	5.204747
98.0	5.204747
99.0	5.204747
100.0	5.204747