## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB70_Pl1-CRR995074.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB70_Pl1-CRR995074.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB70_Pl1-CRR995074.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:13 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	13241642	0	0	3835156	2285243	0.289628	34980198

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.171936
2.0	1.974544
3.0	2.524214
4.0	2.900659
5.0	3.15847
6.0	3.335033
7.0	3.455954
8.0	3.538767
9.0	3.595481
10.0	3.634323
11.0	3.660924
12.0	3.679142
13.0	3.691618
14.0	3.700163
15.0	3.706015
16.0	3.710022
17.0	3.712767
18.0	3.714647
19.0	3.715934
20.0	3.716816
21.0	3.71742
22.0	3.717833
23.0	3.718116
24.0	3.71831
25.0	3.718443
26.0	3.718534
27.0	3.718596
28.0	3.718639
29.0	3.718668
30.0	3.718688
31.0	3.718702
32.0	3.718711
33.0	3.718718
34.0	3.718722
35.0	3.718725
36.0	3.718727
37.0	3.718729
38.0	3.71873
39.0	3.71873
40.0	3.718731
41.0	3.718731
42.0	3.718731
43.0	3.718731
44.0	3.718732
45.0	3.718732
46.0	3.718732
47.0	3.718732
48.0	3.718732
49.0	3.718732
50.0	3.718732
51.0	3.718732
52.0	3.718732
53.0	3.718732
54.0	3.718732
55.0	3.718732
56.0	3.718732
57.0	3.718732
58.0	3.718732
59.0	3.718732
60.0	3.718732
61.0	3.718732
62.0	3.718732
63.0	3.718732
64.0	3.718732
65.0	3.718732
66.0	3.718732
67.0	3.718732
68.0	3.718732
69.0	3.718732
70.0	3.718732
71.0	3.718732
72.0	3.718732
73.0	3.718732
74.0	3.718732
75.0	3.718732
76.0	3.718732
77.0	3.718732
78.0	3.718732
79.0	3.718732
80.0	3.718732
81.0	3.718732
82.0	3.718732
83.0	3.718732
84.0	3.718732
85.0	3.718732
86.0	3.718732
87.0	3.718732
88.0	3.718732
89.0	3.718732
90.0	3.718732
91.0	3.718732
92.0	3.718732
93.0	3.718732
94.0	3.718732
95.0	3.718732
96.0	3.718732
97.0	3.718732
98.0	3.718732
99.0	3.718732
100.0	3.718732