## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB70_Mu3-CRR995073.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB70_Mu3-CRR995073.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB70_Mu3-CRR995073.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:10 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	17788033	0	0	3916817	2131525	0.220194	63327031

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.118009
2.0	1.962229
3.0	2.599708
4.0	3.081075
5.0	3.44456
6.0	3.719032
7.0	3.926288
8.0	4.082789
9.0	4.200965
10.0	4.2902
11.0	4.357583
12.0	4.408464
13.0	4.446885
14.0	4.475897
15.0	4.497805
16.0	4.514347
17.0	4.526839
18.0	4.536271
19.0	4.543393
20.0	4.548772
21.0	4.552833
22.0	4.5559
23.0	4.558215
24.0	4.559964
25.0	4.561284
26.0	4.562281
27.0	4.563034
28.0	4.563602
29.0	4.564032
30.0	4.564356
31.0	4.564601
32.0	4.564786
33.0	4.564925
34.0	4.56503
35.0	4.56511
36.0	4.56517
37.0	4.565215
38.0	4.56525
39.0	4.565276
40.0	4.565295
41.0	4.56531
42.0	4.565321
43.0	4.565329
44.0	4.565336
45.0	4.565341
46.0	4.565344
47.0	4.565347
48.0	4.565349
49.0	4.565351
50.0	4.565352
51.0	4.565353
52.0	4.565353
53.0	4.565354
54.0	4.565354
55.0	4.565355
56.0	4.565355
57.0	4.565355
58.0	4.565355
59.0	4.565355
60.0	4.565355
61.0	4.565355
62.0	4.565355
63.0	4.565355
64.0	4.565355
65.0	4.565355
66.0	4.565355
67.0	4.565355
68.0	4.565355
69.0	4.565355
70.0	4.565355
71.0	4.565355
72.0	4.565355
73.0	4.565355
74.0	4.565355
75.0	4.565355
76.0	4.565355
77.0	4.565355
78.0	4.565355
79.0	4.565355
80.0	4.565355
81.0	4.565355
82.0	4.565355
83.0	4.565355
84.0	4.565355
85.0	4.565355
86.0	4.565355
87.0	4.565355
88.0	4.565355
89.0	4.565355
90.0	4.565355
91.0	4.565355
92.0	4.565355
93.0	4.565355
94.0	4.565355
95.0	4.565355
96.0	4.565355
97.0	4.565355
98.0	4.565355
99.0	4.565355
100.0	4.565355