## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB70_Mu2-CRR995072.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB70_Mu2-CRR995072.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB70_Mu2-CRR995072.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:13 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	21334572	0	0	15544630	11161672	0.728612	8091467

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.297444
2.0	1.39034
3.0	1.396991
4.0	1.397467
5.0	1.397501
6.0	1.397504
7.0	1.397504
8.0	1.397504
9.0	1.397504
10.0	1.397504
11.0	1.397504
12.0	1.397504
13.0	1.397504
14.0	1.397504
15.0	1.397504
16.0	1.397504
17.0	1.397504
18.0	1.397504
19.0	1.397504
20.0	1.397504
21.0	1.397504
22.0	1.397504
23.0	1.397504
24.0	1.397504
25.0	1.397504
26.0	1.397504
27.0	1.397504
28.0	1.397504
29.0	1.397504
30.0	1.397504
31.0	1.397504
32.0	1.397504
33.0	1.397504
34.0	1.397504
35.0	1.397504
36.0	1.397504
37.0	1.397504
38.0	1.397504
39.0	1.397504
40.0	1.397504
41.0	1.397504
42.0	1.397504
43.0	1.397504
44.0	1.397504
45.0	1.397504
46.0	1.397504
47.0	1.397504
48.0	1.397504
49.0	1.397504
50.0	1.397504
51.0	1.397504
52.0	1.397504
53.0	1.397504
54.0	1.397504
55.0	1.397504
56.0	1.397504
57.0	1.397504
58.0	1.397504
59.0	1.397504
60.0	1.397504
61.0	1.397504
62.0	1.397504
63.0	1.397504
64.0	1.397504
65.0	1.397504
66.0	1.397504
67.0	1.397504
68.0	1.397504
69.0	1.397504
70.0	1.397504
71.0	1.397504
72.0	1.397504
73.0	1.397504
74.0	1.397504
75.0	1.397504
76.0	1.397504
77.0	1.397504
78.0	1.397504
79.0	1.397504
80.0	1.397504
81.0	1.397504
82.0	1.397504
83.0	1.397504
84.0	1.397504
85.0	1.397504
86.0	1.397504
87.0	1.397504
88.0	1.397504
89.0	1.397504
90.0	1.397504
91.0	1.397504
92.0	1.397504
93.0	1.397504
94.0	1.397504
95.0	1.397504
96.0	1.397504
97.0	1.397504
98.0	1.397504
99.0	1.397504
100.0	1.397504