## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB70_Mu1-CRR995071.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB70_Mu1-CRR995071.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB70_Mu1-CRR995071.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:11 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	14231980	0	0	4183854	2434122	0.293976	35736136

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.168335
2.0	1.952863
3.0	2.479668
4.0	2.833414
5.0	3.070952
6.0	3.230457
7.0	3.337564
8.0	3.409485
9.0	3.45778
10.0	3.490209
11.0	3.511985
12.0	3.526608
13.0	3.536427
14.0	3.54302
15.0	3.547448
16.0	3.550421
17.0	3.552417
18.0	3.553757
19.0	3.554658
20.0	3.555262
21.0	3.555668
22.0	3.55594
23.0	3.556124
24.0	3.556246
25.0	3.556329
26.0	3.556384
27.0	3.556422
28.0	3.556447
29.0	3.556463
30.0	3.556475
31.0	3.556482
32.0	3.556487
33.0	3.556491
34.0	3.556493
35.0	3.556494
36.0	3.556495
37.0	3.556496
38.0	3.556497
39.0	3.556497
40.0	3.556497
41.0	3.556497
42.0	3.556497
43.0	3.556497
44.0	3.556498
45.0	3.556498
46.0	3.556498
47.0	3.556498
48.0	3.556498
49.0	3.556498
50.0	3.556498
51.0	3.556498
52.0	3.556498
53.0	3.556498
54.0	3.556498
55.0	3.556498
56.0	3.556498
57.0	3.556498
58.0	3.556498
59.0	3.556498
60.0	3.556498
61.0	3.556498
62.0	3.556498
63.0	3.556498
64.0	3.556498
65.0	3.556498
66.0	3.556498
67.0	3.556498
68.0	3.556498
69.0	3.556498
70.0	3.556498
71.0	3.556498
72.0	3.556498
73.0	3.556498
74.0	3.556498
75.0	3.556498
76.0	3.556498
77.0	3.556498
78.0	3.556498
79.0	3.556498
80.0	3.556498
81.0	3.556498
82.0	3.556498
83.0	3.556498
84.0	3.556498
85.0	3.556498
86.0	3.556498
87.0	3.556498
88.0	3.556498
89.0	3.556498
90.0	3.556498
91.0	3.556498
92.0	3.556498
93.0	3.556498
94.0	3.556498
95.0	3.556498
96.0	3.556498
97.0	3.556498
98.0	3.556498
99.0	3.556498
100.0	3.556498