## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB70_Li3-CRR995070.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB70_Li3-CRR995070.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB70_Li3-CRR995070.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:14 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	26014387	0	0	6660579	2718379	0.256034	60825965

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.093658
2.0	1.80674
3.0	2.271682
4.0	2.574831
5.0	2.77249
6.0	2.901366
7.0	2.985396
8.0	3.040185
9.0	3.075908
10.0	3.0992
11.0	3.114387
12.0	3.124289
13.0	3.130745
14.0	3.134955
15.0	3.137699
16.0	3.139489
17.0	3.140656
18.0	3.141417
19.0	3.141913
20.0	3.142236
21.0	3.142447
22.0	3.142585
23.0	3.142674
24.0	3.142733
25.0	3.142771
26.0	3.142796
27.0	3.142812
28.0	3.142822
29.0	3.142829
30.0	3.142834
31.0	3.142837
32.0	3.142839
33.0	3.14284
34.0	3.142841
35.0	3.142841
36.0	3.142842
37.0	3.142842
38.0	3.142842
39.0	3.142842
40.0	3.142842
41.0	3.142842
42.0	3.142842
43.0	3.142842
44.0	3.142842
45.0	3.142842
46.0	3.142842
47.0	3.142842
48.0	3.142842
49.0	3.142842
50.0	3.142842
51.0	3.142842
52.0	3.142842
53.0	3.142842
54.0	3.142842
55.0	3.142842
56.0	3.142842
57.0	3.142842
58.0	3.142842
59.0	3.142842
60.0	3.142842
61.0	3.142842
62.0	3.142842
63.0	3.142842
64.0	3.142842
65.0	3.142842
66.0	3.142842
67.0	3.142842
68.0	3.142842
69.0	3.142842
70.0	3.142842
71.0	3.142842
72.0	3.142842
73.0	3.142842
74.0	3.142842
75.0	3.142842
76.0	3.142842
77.0	3.142842
78.0	3.142842
79.0	3.142842
80.0	3.142842
81.0	3.142842
82.0	3.142842
83.0	3.142842
84.0	3.142842
85.0	3.142842
86.0	3.142842
87.0	3.142842
88.0	3.142842
89.0	3.142842
90.0	3.142842
91.0	3.142842
92.0	3.142842
93.0	3.142842
94.0	3.142842
95.0	3.142842
96.0	3.142842
97.0	3.142842
98.0	3.142842
99.0	3.142842
100.0	3.142842